Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 YAR061WYAR061W 204 nt5.03□□□□□ -1.6
MSH2P25847 FMP41YNL168C 780 nt5.03□□□□□ -1.6
MSH2P25847 SRL4YPL033C 846 nt5.03□□□□□ -1.6
MSH2P25847 SLI1YGR212W 1407 nt5.03□□□□□ -1.6
MSH2P25847 YVC1YOR087W 2028 nt5.02□□□□□ -1.61
MSH2P25847 YLR108CYLR108C 1458 nt5.02□□□□□ -1.61
MSH2P25847 GLN4YOR168W 2430 nt5.02□□□□□ -1.61
MSH2P25847 ROT2YBR229C 2865 nt5.02□□□□□ -1.61
MSH2P25847 GPM2YDL021W 936 nt5.02□□□□□ -1.61
MSH2P25847 YNL320WYNL320W 855 nt5.02□□□□□ -1.61
MSH2P25847 snR11snR11 258 nt5.02□□□□□ -1.61
MSH2P25847 YOR263CYOR263C 408 nt5.02□□□□□ -1.61
MSH2P25847 RAD30YDR419W 1899 nt5.02□□□□□ -1.61
MSH2P25847 DNF2YDR093W 4839 nt5.02□□□□□ -1.61
MSH2P25847 NHP10YDL002C 612 nt5.01□□□□□ -1.61
MSH2P25847 snR83snR83 306 nt5.01□□□□□ -1.61
MSH2P25847 YGR035W-AYGR035W-A 222 nt5.01□□□□□ -1.61
MSH2P25847 GTF1YGR102C 552 nt5.01□□□□□ -1.61
MSH2P25847 YPT35YHR105W 645 nt5.01□□□□□ -1.61
MSH2P25847 MET14YKL001C 609 nt5.01□□□□□ -1.61
MSH2P25847 ECM9YKR004C 1134 nt5.01□□□□□ -1.61
MSH2P25847 SFH1YLR321C 1281 nt5.01□□□□□ -1.61
MSH2P25847 YLR347W-AYLR347W-A 141 nt5.01□□□□□ -1.61
MSH2P25847 MRPL17YNL252C 846 nt5.01□□□□□ -1.61
MSH2P25847 DHR2YKL078W 2208 nt5.01□□□□□ -1.61
MSH2P25847 SAF1YBR280C 1914 nt5.01□□□□□ -1.61
MSH2P25847 FAP1YNL023C 2898 nt5.01□□□□□ -1.61
MSH2P25847 RSC6YCR052W 1452 nt5□□□□□ -1.61
MSH2P25847 PRP31YGR091W 1485 nt5□□□□□ -1.61
MSH2P25847 PRM1YNL279W 1986 nt5□□□□□ -1.61
MSH2P25847 PCA1YBR295W 3651 nt5□□□□□ -1.61
MSH2P25847 SER33YIL074C 1410 nt5□□□□□ -1.61
MSH2P25847 FAR10YLR238W 1437 nt5□□□□□ -1.61
MSH2P25847 CTR86YCR054C 1692 nt5□□□□□ -1.61
MSH2P25847 RXT3YDL076C 885 nt5□□□□□ -1.61
MSH2P25847 YDR133CYDR133C 336 nt5□□□□□ -1.61
MSH2P25847 STE2YFL026W 1296 nt5□□□□□ -1.61
MSH2P25847 PUS6YGR169C 1215 nt5□□□□□ -1.61
MSH2P25847 GCD14YJL125C 1152 nt5□□□□□ -1.61
MSH2P25847 AHP1YLR109W 531 nt5□□□□□ -1.61
MSH2P25847 MET31YPL038W 534 nt5□□□□□ -1.61
MSH2P25847 PBP2YBR233W 1242 nt5□□□□□ -1.61
MSH2P25847 THI7YLR237W 1797 nt5□□□□□ -1.61
MSH2P25847 SST2YLR452C 2097 nt5□□□□□ -1.61
MSH2P25847 ATM1YMR301C 2073 nt5□□□□□ -1.61
MSH2P25847 SMP3YOR149C 1551 nt4.99□□□□□ -1.61
MSH2P25847 MET17YLR303W 1335 nt4.99□□□□□ -1.61
MSH2P25847 TFC7YOR110W 1308 nt4.99□□□□□ -1.61
MSH2P25847 FDC1YDR539W 1512 nt4.99□□□□□ -1.61
MSH2P25847 MIG1YGL035C 1515 nt4.99□□□□□ -1.61
MSH2P25847 SEG2YKL105C 3399 nt4.99□□□□□ -1.61
MSH2P25847 SLC1YDL052C 912 nt4.99□□□□□ -1.61
MSH2P25847 PHO13YDL236W 939 nt4.99□□□□□ -1.61
MSH2P25847 YDR042CYDR042C 603 nt4.99□□□□□ -1.61
MSH2P25847 YFL051CYFL051C 483 nt4.99□□□□□ -1.61
MSH2P25847 THI5YFL058W 1023 nt4.99□□□□□ -1.61
MSH2P25847 NBP1YLR457C 960 nt4.99□□□□□ -1.61
MSH2P25847 THI12YNL332W 1023 nt4.99□□□□□ -1.61
MSH2P25847 HSH49YOR319W 642 nt4.99□□□□□ -1.61
MSH2P25847 PUT2YHR037W 1728 nt4.99□□□□□ -1.61
MSH2P25847 VHC1YBR235W 3363 nt4.98□□□□□ -1.61
MSH2P25847 YOS1YER074W-A 258 nt4.98□□□□□ -1.61
MSH2P25847 RPL28YGL103W 450 nt4.98□□□□□ -1.61
MSH2P25847 TRX2YGR209C 315 nt4.98□□□□□ -1.61
MSH2P25847 BAT2YJR148W 1131 nt4.98□□□□□ -1.61
MSH2P25847 RCN1YKL159C 636 nt4.98□□□□□ -1.61
MSH2P25847 KTR2YKR061W 1278 nt4.98□□□□□ -1.61
MSH2P25847 MED11YMR112C 396 nt4.98□□□□□ -1.61
MSH2P25847 QCR2YPR191W 1107 nt4.98□□□□□ -1.61
MSH2P25847 ERV15YBR210W 429 nt4.98□□□□□ -1.61
MSH2P25847 UBX7YBR273C 1311 nt4.97□□□□□ -1.61
MSH2P25847 CPS1YJL172W 1731 nt4.97□□□□□ -1.61
MSH2P25847 JEM1YJL073W 1938 nt4.97□□□□□ -1.61
MSH2P25847 DOA1YKL213C 2148 nt4.97□□□□□ -1.61
MSH2P25847 PFK1YGR240C 2964 nt4.97□□□□□ -1.61
MSH2P25847 SYF1YDR416W 2580 nt4.97□□□□□ -1.61
MSH2P25847 BUD6YLR319C 2367 nt4.97□□□□□ -1.61
MSH2P25847 HRK1YOR267C 2280 nt4.97□□□□□ -1.61
MSH2P25847 YDR131CYDR131C 1671 nt4.97□□□□□ -1.61
MSH2P25847 DIT2YDR402C 1470 nt4.97□□□□□ -1.61
MSH2P25847 MGA1YGR249W 1371 nt4.97□□□□□ -1.61
MSH2P25847 NSG1YHR133C 876 nt4.97□□□□□ -1.61
MSH2P25847 TEM1YML064C 738 nt4.97□□□□□ -1.61
MSH2P25847 YNL057WYNL057W 333 nt4.97□□□□□ -1.61
MSH2P25847 YNR025CYNR025C 360 nt4.97□□□□□ -1.61
MSH2P25847 ZPS1YOL154W 750 nt4.97□□□□□ -1.61
MSH2P25847 CDC21YOR074C 915 nt4.97□□□□□ -1.61
MSH2P25847 FDH2YPL275W 711 nt4.97□□□□□ -1.61
MSH2P25847 NUP116YMR047C 3342 nt4.97□□□□□ -1.61
MSH2P25847 RPC11YDR045C 333 nt4.96□□□□□ -1.62
MSH2P25847 TAF10YDR167W 621 nt4.96□□□□□ -1.62
MSH2P25847 LSM4YER112W 564 nt4.96□□□□□ -1.62
MSH2P25847 OST5YGL226C-A 261 nt4.96□□□□□ -1.62
MSH2P25847 TDA10YGR205W 873 nt4.96□□□□□ -1.62
MSH2P25847 SVP26YHR181W 687 nt4.96□□□□□ -1.62
MSH2P25847 YIL156W-AYIL156W-A 402 nt4.96□□□□□ -1.62
MSH2P25847 YVH1YIR026C 1095 nt4.96□□□□□ -1.62
MSH2P25847 SUB1YMR039C 879 nt4.96□□□□□ -1.62
MSH2P25847 GPI12YMR281W 915 nt4.96□□□□□ -1.62
MSH2P25847 PEP4YPL154C 1218 nt4.96□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms