Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.75■□□□□ 0.75
CD53P19397 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CD53P19397 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD53P19397 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
CD53P19397 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CD53P19397 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.74■□□□□ 0.75
CD53P19397 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
CD53P19397 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.74■□□□□ 0.75
CD53P19397 AC004448.1-201ENST00000458332 883 ntBASIC19.74■□□□□ 0.75
CD53P19397 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 AC091305.1-201ENST00000479476 895 ntBASIC19.74■□□□□ 0.75
CD53P19397 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
CD53P19397 MIR6821-201ENST00000617625 74 ntBASIC19.74■□□□□ 0.75
CD53P19397 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.74■□□□□ 0.75
CD53P19397 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CD53P19397 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD53P19397 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.73■□□□□ 0.75
CD53P19397 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.73■□□□□ 0.75
CD53P19397 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CD53P19397 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.73■□□□□ 0.75
CD53P19397 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.73■□□□□ 0.75
CD53P19397 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CD53P19397 AC079630.1-202ENST00000618127 1840 ntBASIC19.73■□□□□ 0.75
CD53P19397 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.73■□□□□ 0.75
CD53P19397 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD53P19397 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CD53P19397 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD53P19397 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD53P19397 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.72■□□□□ 0.75
CD53P19397 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD53P19397 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD53P19397 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.72■□□□□ 0.75
CD53P19397 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.72■□□□□ 0.75
CD53P19397 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.72■□□□□ 0.75
CD53P19397 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CD53P19397 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CD53P19397 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.72■□□□□ 0.75
CD53P19397 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.72■□□□□ 0.75
CD53P19397 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.72■□□□□ 0.75
CD53P19397 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD53P19397 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD53P19397 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD53P19397 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CD53P19397 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CD53P19397 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CD53P19397 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD53P19397 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD53P19397 AC005703.6-201ENST00000623265 1329 ntBASIC19.71■□□□□ 0.75
CD53P19397 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD53P19397 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.71■□□□□ 0.75
CD53P19397 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.71■□□□□ 0.75
CD53P19397 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CD53P19397 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.7■□□□□ 0.74
CD53P19397 SYT6-210ENST00000641643 1587 ntBASIC19.7■□□□□ 0.74
CD53P19397 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CD53P19397 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CD53P19397 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 AC097381.1-201ENST00000429019 1296 ntBASIC19.7■□□□□ 0.74
CD53P19397 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.7■□□□□ 0.74
CD53P19397 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.7■□□□□ 0.74
CD53P19397 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.7■□□□□ 0.74
CD53P19397 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD53P19397 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms