Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
CSB-PGBD3P0DP91 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CSB-PGBD3P0DP91 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.2■■■□□ 2.26
CSB-PGBD3P0DP91 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CSB-PGBD3P0DP91 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
CSB-PGBD3P0DP91 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC29.19■■■□□ 2.26
CSB-PGBD3P0DP91 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC29.19■■■□□ 2.26
CSB-PGBD3P0DP91 MAZ-216ENST00000616501 991 ntTSL 5 BASIC29.19■■■□□ 2.26
CSB-PGBD3P0DP91 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
CSB-PGBD3P0DP91 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC29.18■■■□□ 2.26
CSB-PGBD3P0DP91 GAMT-205ENST00000640762 751 ntTSL 5 BASIC29.18■■■□□ 2.26
CSB-PGBD3P0DP91 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CSB-PGBD3P0DP91 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CSB-PGBD3P0DP91 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CSB-PGBD3P0DP91 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.17■■■□□ 2.26
CSB-PGBD3P0DP91 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CSB-PGBD3P0DP91 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC29.17■■■□□ 2.26
CSB-PGBD3P0DP91 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CSB-PGBD3P0DP91 AC104187.1-201ENST00000607510 612 ntBASIC29.17■■■□□ 2.26
CSB-PGBD3P0DP91 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CSB-PGBD3P0DP91 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 AL121832.2-201ENST00000610979 668 ntBASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 AL050303.2-201ENST00000619798 666 ntBASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 USP45-205ENST00000472914 1617 ntTSL 5 BASIC29.16■■■□□ 2.26
CSB-PGBD3P0DP91 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CSB-PGBD3P0DP91 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
CSB-PGBD3P0DP91 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CSB-PGBD3P0DP91 AC083906.2-201ENST00000511578 360 ntBASIC29.15■■■□□ 2.26
CSB-PGBD3P0DP91 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CSB-PGBD3P0DP91 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CSB-PGBD3P0DP91 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
CSB-PGBD3P0DP91 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CSB-PGBD3P0DP91 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CSB-PGBD3P0DP91 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC29.14■■■□□ 2.26
CSB-PGBD3P0DP91 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CSB-PGBD3P0DP91 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CSB-PGBD3P0DP91 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CSB-PGBD3P0DP91 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC29.14■■■□□ 2.26
CSB-PGBD3P0DP91 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
CSB-PGBD3P0DP91 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
CSB-PGBD3P0DP91 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 TSPY20P-201ENST00000450910 630 ntBASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 AC142086.2-201ENST00000569753 217 ntBASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
CSB-PGBD3P0DP91 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
CSB-PGBD3P0DP91 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CSB-PGBD3P0DP91 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CSB-PGBD3P0DP91 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC29.12■■■□□ 2.25
CSB-PGBD3P0DP91 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.12■■■□□ 2.25
CSB-PGBD3P0DP91 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC29.12■■■□□ 2.25
CSB-PGBD3P0DP91 KRT87P-202ENST00000534226 1464 ntBASIC29.11■■■□□ 2.25
CSB-PGBD3P0DP91 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CSB-PGBD3P0DP91 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC29.11■■■□□ 2.25
CSB-PGBD3P0DP91 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CSB-PGBD3P0DP91 AC005224.4-201ENST00000583262 1652 ntBASIC29.11■■■□□ 2.25
CSB-PGBD3P0DP91 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC29.11■■■□□ 2.25
CSB-PGBD3P0DP91 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 TSPY6P-201ENST00000448518 926 ntBASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 AC231657.2-201ENST00000624556 255 ntBASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CSB-PGBD3P0DP91 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 PARP1-202ENST00000366792 553 ntTSL 3 BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 AC007322.1-201ENST00000426983 750 ntBASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 AC005181.1-201ENST00000604782 1256 ntBASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC29.09■■■□□ 2.25
CSB-PGBD3P0DP91 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CSB-PGBD3P0DP91 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC29.08■■■□□ 2.25
CSB-PGBD3P0DP91 DUX4L16-201ENST00000555130 1264 ntBASIC29.08■■■□□ 2.25
CSB-PGBD3P0DP91 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms