Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HOXC6P09630 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HOXC6P09630 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
HOXC6P09630 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.89■■□□□ 1.58
HOXC6P09630 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.89■■□□□ 1.58
HOXC6P09630 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HOXC6P09630 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HOXC6P09630 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
HOXC6P09630 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.89■■□□□ 1.57
HOXC6P09630 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HOXC6P09630 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HOXC6P09630 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HOXC6P09630 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HOXC6P09630 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
HOXC6P09630 GPX1P1-201ENST00000388829 606 ntBASIC24.88■■□□□ 1.57
HOXC6P09630 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
HOXC6P09630 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HOXC6P09630 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.88■■□□□ 1.57
HOXC6P09630 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HOXC6P09630 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.88■■□□□ 1.57
HOXC6P09630 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
HOXC6P09630 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
HOXC6P09630 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.87■■□□□ 1.57
HOXC6P09630 LINC01124-201ENST00000409786 2117 ntBASIC24.87■■□□□ 1.57
HOXC6P09630 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.87■■□□□ 1.57
HOXC6P09630 MFSD11-216ENST00000590393 1141 ntBASIC24.87■■□□□ 1.57
HOXC6P09630 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HOXC6P09630 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.87■■□□□ 1.57
HOXC6P09630 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.87■■□□□ 1.57
HOXC6P09630 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
HOXC6P09630 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HOXC6P09630 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
HOXC6P09630 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HOXC6P09630 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.86■■□□□ 1.57
HOXC6P09630 AC142086.2-201ENST00000569753 217 ntBASIC24.86■■□□□ 1.57
HOXC6P09630 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HOXC6P09630 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HOXC6P09630 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.86■■□□□ 1.57
HOXC6P09630 AL353803.4-201ENST00000565882 1934 ntBASIC24.85■■□□□ 1.57
HOXC6P09630 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
HOXC6P09630 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HOXC6P09630 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HOXC6P09630 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.85■■□□□ 1.57
HOXC6P09630 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.85■■□□□ 1.57
HOXC6P09630 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
HOXC6P09630 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HOXC6P09630 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
HOXC6P09630 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.85■■□□□ 1.57
HOXC6P09630 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
HOXC6P09630 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HOXC6P09630 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HOXC6P09630 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HOXC6P09630 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
HOXC6P09630 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.84■■□□□ 1.57
HOXC6P09630 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.84■■□□□ 1.57
HOXC6P09630 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.84■■□□□ 1.57
HOXC6P09630 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HOXC6P09630 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.84■■□□□ 1.57
HOXC6P09630 LINC00543-201ENST00000567234 1845 ntBASIC24.84■■□□□ 1.57
HOXC6P09630 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
HOXC6P09630 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HOXC6P09630 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.83■■□□□ 1.57
HOXC6P09630 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
HOXC6P09630 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.83■■□□□ 1.57
HOXC6P09630 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.57
HOXC6P09630 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
HOXC6P09630 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.83■■□□□ 1.56
HOXC6P09630 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
HOXC6P09630 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HOXC6P09630 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HOXC6P09630 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HOXC6P09630 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.82■■□□□ 1.56
HOXC6P09630 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HOXC6P09630 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HOXC6P09630 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.82■■□□□ 1.56
HOXC6P09630 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
HOXC6P09630 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
HOXC6P09630 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.81■■□□□ 1.56
HOXC6P09630 AL050303.2-201ENST00000619798 666 ntBASIC24.81■■□□□ 1.56
HOXC6P09630 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HOXC6P09630 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HOXC6P09630 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.81■■□□□ 1.56
HOXC6P09630 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HOXC6P09630 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
HOXC6P09630 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
HOXC6P09630 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.8■■□□□ 1.56
HOXC6P09630 TMEM191A-211ENST00000637163 1067 ntBASIC24.8■■□□□ 1.56
HOXC6P09630 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HOXC6P09630 AC005224.4-201ENST00000583262 1652 ntBASIC24.8■■□□□ 1.56
HOXC6P09630 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.8■■□□□ 1.56
HOXC6P09630 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
HOXC6P09630 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HOXC6P09630 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
HOXC6P09630 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HOXC6P09630 KRT87P-202ENST00000534226 1464 ntBASIC24.79■■□□□ 1.56
HOXC6P09630 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
HOXC6P09630 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
HOXC6P09630 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.79■■□□□ 1.56
HOXC6P09630 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.79■■□□□ 1.56
HOXC6P09630 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms