Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
THBS1P07996 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
THBS1P07996 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
THBS1P07996 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
THBS1P07996 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
THBS1P07996 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.11■□□□□ 0.81
THBS1P07996 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
THBS1P07996 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.11■□□□□ 0.81
THBS1P07996 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.11■□□□□ 0.81
THBS1P07996 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.11■□□□□ 0.81
THBS1P07996 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.11■□□□□ 0.81
THBS1P07996 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
THBS1P07996 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
THBS1P07996 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
THBS1P07996 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
THBS1P07996 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
THBS1P07996 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.11■□□□□ 0.81
THBS1P07996 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS1P07996 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS1P07996 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
THBS1P07996 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS1P07996 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
THBS1P07996 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS1P07996 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS1P07996 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS1P07996 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS1P07996 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
THBS1P07996 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.09■□□□□ 0.81
THBS1P07996 MIR3181-201ENST00000578512 73 ntBASIC20.09■□□□□ 0.81
THBS1P07996 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.09■□□□□ 0.81
THBS1P07996 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THBS1P07996 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
THBS1P07996 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
THBS1P07996 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THBS1P07996 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THBS1P07996 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.08■□□□□ 0.81
THBS1P07996 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
THBS1P07996 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.08■□□□□ 0.81
THBS1P07996 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.08■□□□□ 0.81
THBS1P07996 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THBS1P07996 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THBS1P07996 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.08■□□□□ 0.81
THBS1P07996 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.08■□□□□ 0.81
THBS1P07996 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.08■□□□□ 0.81
THBS1P07996 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
THBS1P07996 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
THBS1P07996 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
THBS1P07996 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
THBS1P07996 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
THBS1P07996 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
THBS1P07996 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
THBS1P07996 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
THBS1P07996 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.07■□□□□ 0.8
THBS1P07996 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS1P07996 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
THBS1P07996 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
THBS1P07996 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
THBS1P07996 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS1P07996 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.07■□□□□ 0.8
THBS1P07996 OR2I1P-207ENST00000453522 948 ntBASIC20.07■□□□□ 0.8
THBS1P07996 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.07■□□□□ 0.8
THBS1P07996 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.07■□□□□ 0.8
THBS1P07996 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.07■□□□□ 0.8
THBS1P07996 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.07■□□□□ 0.8
THBS1P07996 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS1P07996 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THBS1P07996 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
THBS1P07996 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
THBS1P07996 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THBS1P07996 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.06■□□□□ 0.8
THBS1P07996 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.06■□□□□ 0.8
THBS1P07996 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
THBS1P07996 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THBS1P07996 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
THBS1P07996 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THBS1P07996 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.06■□□□□ 0.8
THBS1P07996 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
THBS1P07996 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.06■□□□□ 0.8
THBS1P07996 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.06■□□□□ 0.8
THBS1P07996 AC068587.7-201ENST00000641602 218 ntBASIC20.06■□□□□ 0.8
THBS1P07996 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.06■□□□□ 0.8
THBS1P07996 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THBS1P07996 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THBS1P07996 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
THBS1P07996 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
THBS1P07996 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
THBS1P07996 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THBS1P07996 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.05■□□□□ 0.8
THBS1P07996 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.05■□□□□ 0.8
THBS1P07996 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms