Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL5A2P05997 AC098934.4-201ENST00000564127 592 ntBASIC29.23■■■□□ 2.27
COL5A2P05997 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL5A2P05997 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL5A2P05997 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
COL5A2P05997 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COL5A2P05997 AC138932.3-201ENST00000567634 1902 ntBASIC29.22■■■□□ 2.27
COL5A2P05997 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC29.22■■■□□ 2.27
COL5A2P05997 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
COL5A2P05997 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL5A2P05997 PARP1-202ENST00000366792 553 ntTSL 3 BASIC29.21■■■□□ 2.27
COL5A2P05997 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
COL5A2P05997 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC29.21■■■□□ 2.27
COL5A2P05997 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL5A2P05997 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
COL5A2P05997 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL5A2P05997 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC29.21■■■□□ 2.27
COL5A2P05997 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC29.21■■■□□ 2.27
COL5A2P05997 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
COL5A2P05997 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL5A2P05997 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC29.2■■■□□ 2.26
COL5A2P05997 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC29.2■■■□□ 2.26
COL5A2P05997 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.2■■■□□ 2.26
COL5A2P05997 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC29.2■■■□□ 2.26
COL5A2P05997 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.2■■■□□ 2.26
COL5A2P05997 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL5A2P05997 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL5A2P05997 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
COL5A2P05997 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
COL5A2P05997 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL5A2P05997 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
COL5A2P05997 AC007322.1-201ENST00000426983 750 ntBASIC29.19■■■□□ 2.26
COL5A2P05997 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC29.19■■■□□ 2.26
COL5A2P05997 PARP1-210ENST00000629232 477 ntTSL 5 BASIC29.19■■■□□ 2.26
COL5A2P05997 MYCNOS-205ENST00000641950 531 ntBASIC29.19■■■□□ 2.26
COL5A2P05997 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC29.19■■■□□ 2.26
COL5A2P05997 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.19■■■□□ 2.26
COL5A2P05997 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
COL5A2P05997 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC29.18■■■□□ 2.26
COL5A2P05997 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
COL5A2P05997 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
COL5A2P05997 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
COL5A2P05997 CNN2P6-201ENST00000439038 900 ntBASIC29.17■■■□□ 2.26
COL5A2P05997 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC29.17■■■□□ 2.26
COL5A2P05997 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
COL5A2P05997 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC29.17■■■□□ 2.26
COL5A2P05997 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.17■■■□□ 2.26
COL5A2P05997 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
COL5A2P05997 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
COL5A2P05997 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
COL5A2P05997 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
COL5A2P05997 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
COL5A2P05997 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
COL5A2P05997 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC29.17■■■□□ 2.26
COL5A2P05997 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC29.17■■■□□ 2.26
COL5A2P05997 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC29.17■■■□□ 2.26
COL5A2P05997 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.17■■■□□ 2.26
COL5A2P05997 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL5A2P05997 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL5A2P05997 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COL5A2P05997 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COL5A2P05997 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COL5A2P05997 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
COL5A2P05997 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COL5A2P05997 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
COL5A2P05997 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC29.16■■■□□ 2.26
COL5A2P05997 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
COL5A2P05997 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.15■■■□□ 2.26
COL5A2P05997 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
COL5A2P05997 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC29.15■■■□□ 2.26
COL5A2P05997 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
COL5A2P05997 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC29.15■■■□□ 2.26
COL5A2P05997 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
COL5A2P05997 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.14■■■□□ 2.26
COL5A2P05997 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC29.14■■■□□ 2.26
COL5A2P05997 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
COL5A2P05997 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL5A2P05997 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
COL5A2P05997 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.14■■■□□ 2.26
COL5A2P05997 SLC29A4P1-201ENST00000398760 971 ntBASIC29.14■■■□□ 2.26
COL5A2P05997 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
COL5A2P05997 BRI3-207ENST00000539286 699 ntTSL 2 BASIC29.14■■■□□ 2.26
COL5A2P05997 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
COL5A2P05997 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC29.14■■■□□ 2.25
COL5A2P05997 AC142381.3-201ENST00000568208 1670 ntBASIC29.14■■■□□ 2.25
COL5A2P05997 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
COL5A2P05997 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.13■■■□□ 2.25
COL5A2P05997 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL5A2P05997 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.13■■■□□ 2.25
COL5A2P05997 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC29.13■■■□□ 2.25
COL5A2P05997 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL5A2P05997 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
COL5A2P05997 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL5A2P05997 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
COL5A2P05997 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC29.12■■■□□ 2.25
COL5A2P05997 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC29.12■■■□□ 2.25
COL5A2P05997 PFKL-212ENST00000628044 129 ntTSL 3 BASIC29.12■■■□□ 2.25
COL5A2P05997 USP45-205ENST00000472914 1617 ntTSL 5 BASIC29.12■■■□□ 2.25
COL5A2P05997 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
COL5A2P05997 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms