Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CD4P01730 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CD4P01730 ESRRAP2-201ENST00000418437 1549 ntBASIC24.29■■□□□ 1.48
CD4P01730 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.29■■□□□ 1.48
CD4P01730 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CD4P01730 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CD4P01730 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.29■■□□□ 1.48
CD4P01730 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CD4P01730 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CD4P01730 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
CD4P01730 GPX1P1-201ENST00000388829 606 ntBASIC24.28■■□□□ 1.48
CD4P01730 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
CD4P01730 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.28■■□□□ 1.48
CD4P01730 TMEM191A-211ENST00000637163 1067 ntBASIC24.28■■□□□ 1.48
CD4P01730 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CD4P01730 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.28■■□□□ 1.48
CD4P01730 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CD4P01730 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CD4P01730 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CD4P01730 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CD4P01730 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CD4P01730 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.27■■□□□ 1.48
CD4P01730 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.27■■□□□ 1.48
CD4P01730 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.27■■□□□ 1.48
CD4P01730 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.27■■□□□ 1.48
CD4P01730 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
CD4P01730 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.26■■□□□ 1.47
CD4P01730 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.26■■□□□ 1.47
CD4P01730 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CD4P01730 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CD4P01730 AC004687.1-201ENST00000579003 1625 ntBASIC24.26■■□□□ 1.47
CD4P01730 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CD4P01730 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.26■■□□□ 1.47
CD4P01730 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.26■■□□□ 1.47
CD4P01730 AC010141.3-201ENST00000456659 717 ntBASIC24.26■■□□□ 1.47
CD4P01730 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.26■■□□□ 1.47
CD4P01730 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CD4P01730 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CD4P01730 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CD4P01730 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CD4P01730 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.25■■□□□ 1.47
CD4P01730 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CD4P01730 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
CD4P01730 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.25■■□□□ 1.47
CD4P01730 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.25■■□□□ 1.47
CD4P01730 AC142086.2-201ENST00000569753 217 ntBASIC24.25■■□□□ 1.47
CD4P01730 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.25■■□□□ 1.47
CD4P01730 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CD4P01730 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CD4P01730 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CD4P01730 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CD4P01730 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.24■■□□□ 1.47
CD4P01730 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.24■■□□□ 1.47
CD4P01730 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.24■■□□□ 1.47
CD4P01730 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CD4P01730 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CD4P01730 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CD4P01730 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CD4P01730 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.23■■□□□ 1.47
CD4P01730 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CD4P01730 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CD4P01730 AC079140.4-201ENST00000507448 529 ntBASIC24.23■■□□□ 1.47
CD4P01730 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.23■■□□□ 1.47
CD4P01730 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.23■■□□□ 1.47
CD4P01730 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CD4P01730 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CD4P01730 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CD4P01730 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CD4P01730 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CD4P01730 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CD4P01730 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CD4P01730 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.22■■□□□ 1.47
CD4P01730 MFSD11-216ENST00000590393 1141 ntBASIC24.22■■□□□ 1.47
CD4P01730 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CD4P01730 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.22■■□□□ 1.47
CD4P01730 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CD4P01730 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CD4P01730 CD99P1-205ENST00000527459 561 ntBASIC24.21■■□□□ 1.47
CD4P01730 AL050303.2-201ENST00000619798 666 ntBASIC24.21■■□□□ 1.47
CD4P01730 AC087239.1-201ENST00000622671 572 ntBASIC24.21■■□□□ 1.47
CD4P01730 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CD4P01730 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CD4P01730 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.2■■□□□ 1.47
CD4P01730 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CD4P01730 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CD4P01730 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.2■■□□□ 1.46
CD4P01730 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.2■■□□□ 1.46
CD4P01730 ABCB10P4-201ENST00000566803 2184 ntBASIC24.2■■□□□ 1.46
CD4P01730 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CD4P01730 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.19■■□□□ 1.46
CD4P01730 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.19■■□□□ 1.46
CD4P01730 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms