Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF1O95521 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF1O95521 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF1O95521 AC099791.1-201ENST00000416440 715 ntBASIC21.74■■□□□ 1.07
PRAMEF1O95521 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.74■■□□□ 1.07
PRAMEF1O95521 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.74■■□□□ 1.07
PRAMEF1O95521 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.74■■□□□ 1.07
PRAMEF1O95521 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF1O95521 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRAMEF1O95521 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.74■■□□□ 1.07
PRAMEF1O95521 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF1O95521 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF1O95521 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF1O95521 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF1O95521 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRAMEF1O95521 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.73■■□□□ 1.07
PRAMEF1O95521 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PRAMEF1O95521 MIR939-201ENST00000401314 82 ntBASIC21.73■■□□□ 1.07
PRAMEF1O95521 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.73■■□□□ 1.07
PRAMEF1O95521 CA15P2-201ENST00000611168 834 ntBASIC21.73■■□□□ 1.07
PRAMEF1O95521 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
PRAMEF1O95521 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF1O95521 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF1O95521 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF1O95521 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 MIR638-201ENST00000385237 100 ntBASIC21.72■■□□□ 1.07
PRAMEF1O95521 AP005435.1-201ENST00000529293 1178 ntBASIC21.72■■□□□ 1.07
PRAMEF1O95521 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.72■■□□□ 1.07
PRAMEF1O95521 AC126544.1-201ENST00000580842 1059 ntBASIC21.72■■□□□ 1.07
PRAMEF1O95521 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.72■■□□□ 1.07
PRAMEF1O95521 AC087239.1-201ENST00000622671 572 ntBASIC21.72■■□□□ 1.07
PRAMEF1O95521 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PRAMEF1O95521 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 GUSBP5-202ENST00000510805 1989 ntBASIC21.72■■□□□ 1.07
PRAMEF1O95521 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF1O95521 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PRAMEF1O95521 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.71■■□□□ 1.07
PRAMEF1O95521 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF1O95521 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PRAMEF1O95521 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF1O95521 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF1O95521 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF1O95521 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PRAMEF1O95521 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF1O95521 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF1O95521 AC137767.1-201ENST00000602918 1920 ntBASIC21.7■■□□□ 1.07
PRAMEF1O95521 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
PRAMEF1O95521 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF1O95521 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF1O95521 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF1O95521 AC091305.1-201ENST00000479476 895 ntBASIC21.7■■□□□ 1.06
PRAMEF1O95521 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF1O95521 AC005837.3-201ENST00000612163 286 ntBASIC21.7■■□□□ 1.06
PRAMEF1O95521 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF1O95521 AL136967.2-201ENST00000623968 743 ntBASIC21.7■■□□□ 1.06
PRAMEF1O95521 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF1O95521 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PRAMEF1O95521 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PRAMEF1O95521 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PRAMEF1O95521 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 AC010141.3-201ENST00000456659 717 ntBASIC21.69■■□□□ 1.06
PRAMEF1O95521 SUDS3P1-201ENST00000505831 966 ntBASIC21.69■■□□□ 1.06
PRAMEF1O95521 AC142381.2-201ENST00000566120 298 ntBASIC21.69■■□□□ 1.06
PRAMEF1O95521 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.69■■□□□ 1.06
PRAMEF1O95521 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 RASA4CP-201ENST00000424092 1398 ntBASIC21.69■■□□□ 1.06
PRAMEF1O95521 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PRAMEF1O95521 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PRAMEF1O95521 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF1O95521 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF1O95521 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF1O95521 AC080038.3-201ENST00000623346 1952 ntBASIC21.68■■□□□ 1.06
PRAMEF1O95521 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PRAMEF1O95521 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
PRAMEF1O95521 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF1O95521 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF1O95521 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF1O95521 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.68■■□□□ 1.06
PRAMEF1O95521 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PRAMEF1O95521 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
PRAMEF1O95521 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF1O95521 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF1O95521 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF1O95521 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF1O95521 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.67■■□□□ 1.06
PRAMEF1O95521 AL117328.2-201ENST00000624617 1940 ntBASIC21.67■■□□□ 1.06
PRAMEF1O95521 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.67■■□□□ 1.06
PRAMEF1O95521 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms