Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH8O95206 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH8O95206 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH8O95206 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH8O95206 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH8O95206 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH8O95206 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PCDH8O95206 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDH8O95206 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PCDH8O95206 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH8O95206 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.84■■□□□ 1.09
PCDH8O95206 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH8O95206 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH8O95206 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH8O95206 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH8O95206 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH8O95206 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDH8O95206 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH8O95206 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH8O95206 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDH8O95206 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.83■■□□□ 1.09
PCDH8O95206 TERF1P2-201ENST00000583350 1212 ntBASIC21.83■■□□□ 1.09
PCDH8O95206 OXCT2P1-201ENST00000447263 1535 ntBASIC21.83■■□□□ 1.09
PCDH8O95206 DUSP8P3-201ENST00000399571 1760 ntBASIC21.83■■□□□ 1.09
PCDH8O95206 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH8O95206 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH8O95206 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH8O95206 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDH8O95206 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH8O95206 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDH8O95206 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH8O95206 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH8O95206 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH8O95206 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH8O95206 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PCDH8O95206 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.82■■□□□ 1.08
PCDH8O95206 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDH8O95206 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH8O95206 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH8O95206 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDH8O95206 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH8O95206 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH8O95206 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH8O95206 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH8O95206 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.8■■□□□ 1.08
PCDH8O95206 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH8O95206 SMUG1P1-201ENST00000590640 811 ntBASIC21.8■■□□□ 1.08
PCDH8O95206 NTF6G-201ENST00000591094 616 ntBASIC21.8■■□□□ 1.08
PCDH8O95206 AC022517.1-201ENST00000592429 346 ntBASIC21.8■■□□□ 1.08
PCDH8O95206 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PCDH8O95206 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH8O95206 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 BX005040.4-201ENST00000637145 1518 ntBASIC21.8■■□□□ 1.08
PCDH8O95206 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH8O95206 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PCDH8O95206 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH8O95206 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH8O95206 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH8O95206 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDH8O95206 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH8O95206 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDH8O95206 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH8O95206 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH8O95206 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH8O95206 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH8O95206 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PCDH8O95206 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH8O95206 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH8O95206 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH8O95206 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH8O95206 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH8O95206 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH8O95206 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH8O95206 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH8O95206 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH8O95206 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
PCDH8O95206 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH8O95206 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH8O95206 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH8O95206 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDH8O95206 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
PCDH8O95206 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDH8O95206 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms