Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
USP1O94782 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
USP1O94782 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
USP1O94782 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP1O94782 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP1O94782 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP1O94782 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USP1O94782 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.04■■□□□ 1.12
USP1O94782 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
USP1O94782 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
USP1O94782 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.04■■□□□ 1.12
USP1O94782 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.04■■□□□ 1.12
USP1O94782 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.04■■□□□ 1.12
USP1O94782 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.04■■□□□ 1.12
USP1O94782 CA15P2-201ENST00000611168 834 ntBASIC22.04■■□□□ 1.12
USP1O94782 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
USP1O94782 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
USP1O94782 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.04■■□□□ 1.12
USP1O94782 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.04■■□□□ 1.12
USP1O94782 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.04■■□□□ 1.12
USP1O94782 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.04■■□□□ 1.12
USP1O94782 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
USP1O94782 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.03■■□□□ 1.12
USP1O94782 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.03■■□□□ 1.12
USP1O94782 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
USP1O94782 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USP1O94782 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USP1O94782 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USP1O94782 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
USP1O94782 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.03■■□□□ 1.12
USP1O94782 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
USP1O94782 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
USP1O94782 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USP1O94782 AC131212.1-201ENST00000613771 668 ntBASIC22.03■■□□□ 1.12
USP1O94782 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
USP1O94782 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.03■■□□□ 1.12
USP1O94782 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
USP1O94782 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
USP1O94782 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
USP1O94782 AL356441.2-201ENST00000443009 864 ntBASIC22.02■■□□□ 1.12
USP1O94782 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.02■■□□□ 1.12
USP1O94782 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.02■■□□□ 1.12
USP1O94782 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.02■■□□□ 1.12
USP1O94782 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
USP1O94782 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
USP1O94782 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
USP1O94782 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
USP1O94782 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
USP1O94782 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
USP1O94782 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.02■■□□□ 1.11
USP1O94782 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
USP1O94782 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.01■■□□□ 1.11
USP1O94782 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
USP1O94782 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
USP1O94782 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
USP1O94782 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
USP1O94782 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
USP1O94782 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
USP1O94782 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.01■■□□□ 1.11
USP1O94782 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
USP1O94782 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.01■■□□□ 1.11
USP1O94782 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22■■□□□ 1.11
USP1O94782 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22■■□□□ 1.11
USP1O94782 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USP1O94782 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
USP1O94782 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USP1O94782 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
USP1O94782 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
USP1O94782 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.99■■□□□ 1.11
USP1O94782 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
USP1O94782 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
USP1O94782 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
USP1O94782 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP1O94782 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.98■■□□□ 1.11
USP1O94782 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.98■■□□□ 1.11
USP1O94782 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP1O94782 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
USP1O94782 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.98■■□□□ 1.11
USP1O94782 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
USP1O94782 AL356740.2-201ENST00000601559 647 ntBASIC21.98■■□□□ 1.11
USP1O94782 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
USP1O94782 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.98■■□□□ 1.11
USP1O94782 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms