Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KLHL41O60662 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.58■■□□□ 1.05
KLHL41O60662 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
KLHL41O60662 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
KLHL41O60662 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
KLHL41O60662 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.57■■□□□ 1.04
KLHL41O60662 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KLHL41O60662 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KLHL41O60662 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KLHL41O60662 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KLHL41O60662 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KLHL41O60662 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.57■■□□□ 1.04
KLHL41O60662 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.57■■□□□ 1.04
KLHL41O60662 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.57■■□□□ 1.04
KLHL41O60662 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.57■■□□□ 1.04
KLHL41O60662 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KLHL41O60662 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.56■■□□□ 1.04
KLHL41O60662 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.56■■□□□ 1.04
KLHL41O60662 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KLHL41O60662 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
KLHL41O60662 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KLHL41O60662 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.56■■□□□ 1.04
KLHL41O60662 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
KLHL41O60662 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KLHL41O60662 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHL41O60662 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHL41O60662 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHL41O60662 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KLHL41O60662 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHL41O60662 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
KLHL41O60662 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KLHL41O60662 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
KLHL41O60662 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
KLHL41O60662 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KLHL41O60662 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.54■■□□□ 1.04
KLHL41O60662 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
KLHL41O60662 AC096631.2-201ENST00000436136 790 ntBASIC21.54■■□□□ 1.04
KLHL41O60662 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.54■■□□□ 1.04
KLHL41O60662 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KLHL41O60662 SNX5-217ENST00000606557 1087 ntBASIC21.54■■□□□ 1.04
KLHL41O60662 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.54■■□□□ 1.04
KLHL41O60662 AC087742.1-201ENST00000575880 1738 ntBASIC21.54■■□□□ 1.04
KLHL41O60662 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.54■■□□□ 1.04
KLHL41O60662 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.54■■□□□ 1.04
KLHL41O60662 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.54■■□□□ 1.04
KLHL41O60662 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.53■■□□□ 1.04
KLHL41O60662 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.53■■□□□ 1.04
KLHL41O60662 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
KLHL41O60662 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
KLHL41O60662 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.53■■□□□ 1.04
KLHL41O60662 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.53■■□□□ 1.04
KLHL41O60662 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
KLHL41O60662 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.53■■□□□ 1.04
KLHL41O60662 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KLHL41O60662 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KLHL41O60662 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
KLHL41O60662 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.52■■□□□ 1.04
KLHL41O60662 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.52■■□□□ 1.04
KLHL41O60662 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KLHL41O60662 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.52■■□□□ 1.04
KLHL41O60662 AL512631.2-201ENST00000604634 923 ntBASIC21.52■■□□□ 1.04
KLHL41O60662 MIR4466-201ENST00000606121 54 ntBASIC21.52■■□□□ 1.04
KLHL41O60662 AC110285.6-201ENST00000617652 491 ntBASIC21.52■■□□□ 1.04
KLHL41O60662 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.52■■□□□ 1.03
KLHL41O60662 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
KLHL41O60662 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
KLHL41O60662 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KLHL41O60662 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KLHL41O60662 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KLHL41O60662 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KLHL41O60662 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
KLHL41O60662 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.51■■□□□ 1.03
KLHL41O60662 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KLHL41O60662 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
KLHL41O60662 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KLHL41O60662 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.51■■□□□ 1.03
KLHL41O60662 AC005837.3-201ENST00000612163 286 ntBASIC21.51■■□□□ 1.03
KLHL41O60662 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
KLHL41O60662 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KLHL41O60662 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KLHL41O60662 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.5■■□□□ 1.03
KLHL41O60662 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.5■■□□□ 1.03
KLHL41O60662 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
KLHL41O60662 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
KLHL41O60662 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
KLHL41O60662 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KLHL41O60662 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KLHL41O60662 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KLHL41O60662 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms