Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LCMT2O60294 AP005435.1-201ENST00000529293 1178 ntBASIC20.92■□□□□ 0.94
LCMT2O60294 AC027682.1-201ENST00000562846 899 ntBASIC20.92■□□□□ 0.94
LCMT2O60294 AC142381.2-201ENST00000566120 298 ntBASIC20.92■□□□□ 0.94
LCMT2O60294 AC126544.1-201ENST00000580842 1059 ntBASIC20.92■□□□□ 0.94
LCMT2O60294 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LCMT2O60294 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCMT2O60294 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCMT2O60294 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LCMT2O60294 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCMT2O60294 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCMT2O60294 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LCMT2O60294 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LCMT2O60294 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
LCMT2O60294 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCMT2O60294 RASA4CP-201ENST00000424092 1398 ntBASIC20.91■□□□□ 0.94
LCMT2O60294 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.91■□□□□ 0.94
LCMT2O60294 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
LCMT2O60294 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.91■□□□□ 0.94
LCMT2O60294 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.91■□□□□ 0.94
LCMT2O60294 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
LCMT2O60294 AC068587.7-201ENST00000641602 218 ntBASIC20.91■□□□□ 0.94
LCMT2O60294 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 AC127496.7-201ENST00000625110 1798 ntBASIC20.9■□□□□ 0.94
LCMT2O60294 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.9■□□□□ 0.94
LCMT2O60294 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LCMT2O60294 CA15P2-201ENST00000611168 834 ntBASIC20.9■□□□□ 0.94
LCMT2O60294 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 AC137767.1-201ENST00000602918 1920 ntBASIC20.9■□□□□ 0.94
LCMT2O60294 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.9■□□□□ 0.94
LCMT2O60294 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LCMT2O60294 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LCMT2O60294 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LCMT2O60294 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LCMT2O60294 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LCMT2O60294 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
LCMT2O60294 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 AC080038.3-201ENST00000623346 1952 ntBASIC20.89■□□□□ 0.93
LCMT2O60294 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.89■□□□□ 0.93
LCMT2O60294 AC091305.1-201ENST00000479476 895 ntBASIC20.89■□□□□ 0.93
LCMT2O60294 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.89■□□□□ 0.93
LCMT2O60294 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.89■□□□□ 0.93
LCMT2O60294 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.89■□□□□ 0.93
LCMT2O60294 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LCMT2O60294 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LCMT2O60294 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCMT2O60294 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LCMT2O60294 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCMT2O60294 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.88■□□□□ 0.93
LCMT2O60294 AC010141.3-201ENST00000456659 717 ntBASIC20.88■□□□□ 0.93
LCMT2O60294 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LCMT2O60294 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCMT2O60294 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LCMT2O60294 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LCMT2O60294 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LCMT2O60294 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LCMT2O60294 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LCMT2O60294 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.87■□□□□ 0.93
LCMT2O60294 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LCMT2O60294 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LCMT2O60294 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LCMT2O60294 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LCMT2O60294 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.87■□□□□ 0.93
LCMT2O60294 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.87■□□□□ 0.93
LCMT2O60294 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.87■□□□□ 0.93
LCMT2O60294 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LCMT2O60294 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LCMT2O60294 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LCMT2O60294 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.86■□□□□ 0.93
LCMT2O60294 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.86■□□□□ 0.93
LCMT2O60294 GUSBP5-202ENST00000510805 1989 ntBASIC20.86■□□□□ 0.93
LCMT2O60294 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
LCMT2O60294 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LCMT2O60294 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LCMT2O60294 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.86■□□□□ 0.93
LCMT2O60294 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCMT2O60294 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms