Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 AL138724.1-201ENST00000606771 1088 ntBASIC21.8■■□□□ 1.08
PFDN6O15212 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PFDN6O15212 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN6O15212 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PFDN6O15212 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PFDN6O15212 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PFDN6O15212 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
PFDN6O15212 MIR3181-201ENST00000578512 73 ntBASIC21.79■■□□□ 1.08
PFDN6O15212 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.79■■□□□ 1.08
PFDN6O15212 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.79■■□□□ 1.08
PFDN6O15212 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PFDN6O15212 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN6O15212 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PFDN6O15212 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN6O15212 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.78■■□□□ 1.08
PFDN6O15212 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.78■■□□□ 1.08
PFDN6O15212 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.78■■□□□ 1.08
PFDN6O15212 AC068587.7-201ENST00000641602 218 ntBASIC21.78■■□□□ 1.08
PFDN6O15212 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN6O15212 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.78■■□□□ 1.08
PFDN6O15212 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN6O15212 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN6O15212 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PFDN6O15212 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PFDN6O15212 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.77■■□□□ 1.08
PFDN6O15212 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.77■■□□□ 1.08
PFDN6O15212 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PFDN6O15212 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PFDN6O15212 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
PFDN6O15212 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PFDN6O15212 AC131281.2-201ENST00000520478 145 ntBASIC21.76■■□□□ 1.07
PFDN6O15212 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.76■■□□□ 1.07
PFDN6O15212 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PFDN6O15212 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PFDN6O15212 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PFDN6O15212 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PFDN6O15212 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 LINC00526-201ENST00000581067 1875 ntBASIC21.75■■□□□ 1.07
PFDN6O15212 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PFDN6O15212 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.75■■□□□ 1.07
PFDN6O15212 MIR4466-201ENST00000606121 54 ntBASIC21.75■■□□□ 1.07
PFDN6O15212 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.75■■□□□ 1.07
PFDN6O15212 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PFDN6O15212 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PFDN6O15212 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.74■■□□□ 1.07
PFDN6O15212 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.74■■□□□ 1.07
PFDN6O15212 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.74■■□□□ 1.07
PFDN6O15212 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.74■■□□□ 1.07
PFDN6O15212 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.74■■□□□ 1.07
PFDN6O15212 CA15P2-201ENST00000611168 834 ntBASIC21.74■■□□□ 1.07
PFDN6O15212 AC131212.1-201ENST00000613771 668 ntBASIC21.74■■□□□ 1.07
PFDN6O15212 AC087239.1-201ENST00000622671 572 ntBASIC21.74■■□□□ 1.07
PFDN6O15212 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.74■■□□□ 1.07
PFDN6O15212 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.74■■□□□ 1.07
PFDN6O15212 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PFDN6O15212 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PFDN6O15212 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PFDN6O15212 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PFDN6O15212 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PFDN6O15212 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.73■■□□□ 1.07
PFDN6O15212 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PFDN6O15212 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PFDN6O15212 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PFDN6O15212 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms