Protein–RNA interactions for Protein: O00339

MATN2, Matrilin-2, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2O00339 AC135279.3-201ENST00000610945 1311 ntBASIC21.73■■□□□ 1.07
MATN2O00339 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MATN2O00339 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.73■■□□□ 1.07
MATN2O00339 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN2O00339 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN2O00339 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.72■■□□□ 1.07
MATN2O00339 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN2O00339 C11orf96-202ENST00000528572 1834 ntBASIC21.72■■□□□ 1.07
MATN2O00339 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MATN2O00339 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.72■■□□□ 1.07
MATN2O00339 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN2O00339 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.72■■□□□ 1.07
MATN2O00339 PBX2P1-201ENST00000493219 1291 ntBASIC21.72■■□□□ 1.07
MATN2O00339 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MATN2O00339 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.72■■□□□ 1.07
MATN2O00339 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MATN2O00339 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MATN2O00339 AC019069.1-201ENST00000610008 1333 ntBASIC21.72■■□□□ 1.07
MATN2O00339 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MATN2O00339 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN2O00339 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.72■■□□□ 1.07
MATN2O00339 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.71■■□□□ 1.07
MATN2O00339 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MATN2O00339 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MATN2O00339 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MATN2O00339 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MATN2O00339 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MATN2O00339 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MATN2O00339 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
MATN2O00339 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MATN2O00339 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.71■■□□□ 1.07
MATN2O00339 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MATN2O00339 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
MATN2O00339 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN2O00339 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN2O00339 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN2O00339 AC009086.3-201ENST00000623486 1008 ntBASIC21.7■■□□□ 1.06
MATN2O00339 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN2O00339 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN2O00339 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.7■■□□□ 1.06
MATN2O00339 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN2O00339 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MATN2O00339 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 AC080038.3-201ENST00000623346 1952 ntBASIC21.69■■□□□ 1.06
MATN2O00339 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.69■■□□□ 1.06
MATN2O00339 AC011298.3-201ENST00000615796 283 ntBASIC21.69■■□□□ 1.06
MATN2O00339 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
MATN2O00339 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MATN2O00339 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MATN2O00339 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.69■■□□□ 1.06
MATN2O00339 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.68■■□□□ 1.06
MATN2O00339 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 FP325331.1-202ENST00000623531 1380 ntBASIC21.68■■□□□ 1.06
MATN2O00339 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN2O00339 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.67■■□□□ 1.06
MATN2O00339 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.67■■□□□ 1.06
MATN2O00339 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.67■■□□□ 1.06
MATN2O00339 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.67■■□□□ 1.06
MATN2O00339 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 EDA-201ENST00000338901 1233 ntBASIC21.67■■□□□ 1.06
MATN2O00339 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.67■■□□□ 1.06
MATN2O00339 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.67■■□□□ 1.06
MATN2O00339 AC024257.2-201ENST00000549699 147 ntBASIC21.67■■□□□ 1.06
MATN2O00339 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.67■■□□□ 1.06
MATN2O00339 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.67■■□□□ 1.06
MATN2O00339 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
MATN2O00339 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MATN2O00339 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.66■■□□□ 1.06
MATN2O00339 AC087742.1-201ENST00000575880 1738 ntBASIC21.66■■□□□ 1.06
MATN2O00339 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MATN2O00339 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.66■■□□□ 1.06
MATN2O00339 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MATN2O00339 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MATN2O00339 SERBP1P1-201ENST00000396021 1160 ntBASIC21.66■■□□□ 1.06
MATN2O00339 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
MATN2O00339 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.66■■□□□ 1.06
MATN2O00339 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms