Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC1O00299 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIC1O00299 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC1O00299 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CLIC1O00299 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIC1O00299 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC1O00299 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC1O00299 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC1O00299 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC1O00299 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC1O00299 AC010997.5-201ENST00000609182 354 ntBASIC20.57■□□□□ 0.88
CLIC1O00299 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CLIC1O00299 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIC1O00299 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC1O00299 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.57■□□□□ 0.88
CLIC1O00299 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC1O00299 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC1O00299 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC1O00299 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.56■□□□□ 0.88
CLIC1O00299 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CLIC1O00299 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLIC1O00299 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC1O00299 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC1O00299 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC1O00299 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC1O00299 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIC1O00299 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC1O00299 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC1O00299 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC1O00299 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIC1O00299 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC1O00299 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC1O00299 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC1O00299 AC239859.2-201ENST00000444165 318 ntBASIC20.55■□□□□ 0.88
CLIC1O00299 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC1O00299 FAM99A-202ENST00000538190 1989 ntBASIC20.55■□□□□ 0.88
CLIC1O00299 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC1O00299 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC1O00299 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC1O00299 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC1O00299 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC1O00299 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.54■□□□□ 0.88
CLIC1O00299 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC1O00299 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.54■□□□□ 0.88
CLIC1O00299 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
CLIC1O00299 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.54■□□□□ 0.88
CLIC1O00299 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC1O00299 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.54■□□□□ 0.88
CLIC1O00299 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC1O00299 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC1O00299 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC1O00299 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.54■□□□□ 0.88
CLIC1O00299 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLIC1O00299 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.53■□□□□ 0.88
CLIC1O00299 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLIC1O00299 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.53■□□□□ 0.88
CLIC1O00299 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 AC026310.3-201ENST00000625186 2373 ntBASIC20.53■□□□□ 0.88
CLIC1O00299 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.53■□□□□ 0.88
CLIC1O00299 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLIC1O00299 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.53■□□□□ 0.88
CLIC1O00299 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIC1O00299 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLIC1O00299 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIC1O00299 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLIC1O00299 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLIC1O00299 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.52■□□□□ 0.88
CLIC1O00299 TSPY9P-201ENST00000440215 945 ntBASIC20.52■□□□□ 0.88
CLIC1O00299 TSPY11P-201ENST00000442607 1045 ntBASIC20.52■□□□□ 0.88
CLIC1O00299 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLIC1O00299 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLIC1O00299 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLIC1O00299 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.51■□□□□ 0.87
CLIC1O00299 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLIC1O00299 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLIC1O00299 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.51■□□□□ 0.87
CLIC1O00299 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLIC1O00299 AL499627.2-201ENST00000606283 725 ntBASIC20.51■□□□□ 0.87
CLIC1O00299 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CLIC1O00299 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLIC1O00299 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLIC1O00299 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC1O00299 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.5■□□□□ 0.87
CLIC1O00299 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms