Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
DDX39AO00148 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX39AO00148 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.61■■□□□ 1.53
DDX39AO00148 AL354811.1-201ENST00000610286 706 ntBASIC24.61■■□□□ 1.53
DDX39AO00148 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX39AO00148 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX39AO00148 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
DDX39AO00148 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX39AO00148 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX39AO00148 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
DDX39AO00148 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX39AO00148 DUSP8P5-201ENST00000422884 1815 ntBASIC24.61■■□□□ 1.53
DDX39AO00148 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX39AO00148 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.61■■□□□ 1.53
DDX39AO00148 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX39AO00148 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX39AO00148 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.6■■□□□ 1.53
DDX39AO00148 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.6■■□□□ 1.53
DDX39AO00148 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.6■■□□□ 1.53
DDX39AO00148 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX39AO00148 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
DDX39AO00148 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX39AO00148 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DDX39AO00148 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
DDX39AO00148 YBX1P1-201ENST00000445822 960 ntBASIC24.59■■□□□ 1.53
DDX39AO00148 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.59■■□□□ 1.53
DDX39AO00148 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.59■■□□□ 1.53
DDX39AO00148 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX39AO00148 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX39AO00148 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
DDX39AO00148 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
DDX39AO00148 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.58■■□□□ 1.53
DDX39AO00148 AC027612.3-201ENST00000413684 1047 ntBASIC24.58■■□□□ 1.53
DDX39AO00148 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
DDX39AO00148 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.58■■□□□ 1.53
DDX39AO00148 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.58■■□□□ 1.53
DDX39AO00148 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
DDX39AO00148 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
DDX39AO00148 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.58■■□□□ 1.52
DDX39AO00148 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX39AO00148 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX39AO00148 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.57■■□□□ 1.52
DDX39AO00148 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX39AO00148 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.57■■□□□ 1.52
DDX39AO00148 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX39AO00148 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX39AO00148 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
DDX39AO00148 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX39AO00148 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DDX39AO00148 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.56■■□□□ 1.52
DDX39AO00148 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX39AO00148 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX39AO00148 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX39AO00148 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX39AO00148 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.56■■□□□ 1.52
DDX39AO00148 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DDX39AO00148 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX39AO00148 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
DDX39AO00148 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX39AO00148 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.55■■□□□ 1.52
DDX39AO00148 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX39AO00148 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX39AO00148 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX39AO00148 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.55■■□□□ 1.52
DDX39AO00148 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.55■■□□□ 1.52
DDX39AO00148 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
DDX39AO00148 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX39AO00148 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.55■■□□□ 1.52
DDX39AO00148 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DDX39AO00148 OXCT2P1-201ENST00000447263 1535 ntBASIC24.55■■□□□ 1.52
DDX39AO00148 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
DDX39AO00148 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX39AO00148 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX39AO00148 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
DDX39AO00148 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.54■■□□□ 1.52
DDX39AO00148 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.54■■□□□ 1.52
DDX39AO00148 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX39AO00148 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DDX39AO00148 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
DDX39AO00148 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
DDX39AO00148 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX39AO00148 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.53■■□□□ 1.52
DDX39AO00148 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX39AO00148 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX39AO00148 SMUG1P1-201ENST00000590640 811 ntBASIC24.53■■□□□ 1.52
DDX39AO00148 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
DDX39AO00148 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX39AO00148 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX39AO00148 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DDX39AO00148 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
DDX39AO00148 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
DDX39AO00148 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX39AO00148 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX39AO00148 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
DDX39AO00148 AL162430.1-201ENST00000480705 870 ntBASIC24.52■■□□□ 1.52
DDX39AO00148 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
DDX39AO00148 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
DDX39AO00148 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
DDX39AO00148 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
DDX39AO00148 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms