Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
HFM1A2PYH4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
HFM1A2PYH4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
HFM1A2PYH4 NT5C3AP1-201ENST00000394500 1012 ntBASIC32.59■■■□□ 2.81
HFM1A2PYH4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
HFM1A2PYH4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
HFM1A2PYH4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC32.58■■■□□ 2.81
HFM1A2PYH4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
HFM1A2PYH4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
HFM1A2PYH4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
HFM1A2PYH4 CCDC92B-201ENST00000575506 885 ntBASIC32.58■■■□□ 2.81
HFM1A2PYH4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.81
HFM1A2PYH4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
HFM1A2PYH4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
HFM1A2PYH4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
HFM1A2PYH4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC32.57■■■□□ 2.8
HFM1A2PYH4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
HFM1A2PYH4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC32.57■■■□□ 2.8
HFM1A2PYH4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
HFM1A2PYH4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC32.56■■■□□ 2.8
HFM1A2PYH4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
HFM1A2PYH4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
HFM1A2PYH4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
HFM1A2PYH4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
HFM1A2PYH4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
HFM1A2PYH4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
HFM1A2PYH4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
HFM1A2PYH4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
HFM1A2PYH4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
HFM1A2PYH4 AL162430.1-201ENST00000480705 870 ntBASIC32.55■■■□□ 2.8
HFM1A2PYH4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
HFM1A2PYH4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC32.54■■■□□ 2.8
HFM1A2PYH4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC32.54■■■□□ 2.8
HFM1A2PYH4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC32.53■■■□□ 2.8
HFM1A2PYH4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC32.53■■■□□ 2.8
HFM1A2PYH4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
HFM1A2PYH4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
HFM1A2PYH4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC32.53■■■□□ 2.8
HFM1A2PYH4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC32.53■■■□□ 2.8
HFM1A2PYH4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
HFM1A2PYH4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC32.52■■■□□ 2.8
HFM1A2PYH4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC32.52■■■□□ 2.8
HFM1A2PYH4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.52■■■□□ 2.8
HFM1A2PYH4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
HFM1A2PYH4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC32.52■■■□□ 2.8
HFM1A2PYH4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
HFM1A2PYH4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
HFM1A2PYH4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
HFM1A2PYH4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.8
HFM1A2PYH4 AC034268.1-201ENST00000441047 882 ntBASIC32.51■■■□□ 2.8
HFM1A2PYH4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC32.51■■■□□ 2.8
HFM1A2PYH4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC32.51■■■□□ 2.8
HFM1A2PYH4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC32.51■■■□□ 2.8
HFM1A2PYH4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.8
HFM1A2PYH4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
HFM1A2PYH4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
HFM1A2PYH4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
HFM1A2PYH4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
HFM1A2PYH4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
HFM1A2PYH4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
HFM1A2PYH4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
HFM1A2PYH4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
HFM1A2PYH4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
HFM1A2PYH4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
HFM1A2PYH4 BX005040.4-201ENST00000637145 1518 ntBASIC32.5■■■□□ 2.79
HFM1A2PYH4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
HFM1A2PYH4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC32.5■■■□□ 2.79
HFM1A2PYH4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
HFM1A2PYH4 LINC02228-203ENST00000641970 1355 ntBASIC32.5■■■□□ 2.79
HFM1A2PYH4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
HFM1A2PYH4 KRT18P61-201ENST00000585825 1298 ntBASIC32.5■■■□□ 2.79
HFM1A2PYH4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HFM1A2PYH4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
HFM1A2PYH4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
HFM1A2PYH4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
HFM1A2PYH4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HFM1A2PYH4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
HFM1A2PYH4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC32.49■■■□□ 2.79
HFM1A2PYH4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC32.49■■■□□ 2.79
HFM1A2PYH4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HFM1A2PYH4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
HFM1A2PYH4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
HFM1A2PYH4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC32.49■■■□□ 2.79
HFM1A2PYH4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC32.48■■■□□ 2.79
HFM1A2PYH4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
HFM1A2PYH4 AC137767.1-201ENST00000602918 1920 ntBASIC32.48■■■□□ 2.79
HFM1A2PYH4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC32.48■■■□□ 2.79
HFM1A2PYH4 KRT18P5-201ENST00000436075 1291 ntBASIC32.48■■■□□ 2.79
HFM1A2PYH4 AC079089.2-201ENST00000531211 1277 ntBASIC32.48■■■□□ 2.79
HFM1A2PYH4 KRT18P14-201ENST00000534205 1250 ntBASIC32.48■■■□□ 2.79
HFM1A2PYH4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
HFM1A2PYH4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
HFM1A2PYH4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
HFM1A2PYH4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
HFM1A2PYH4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
HFM1A2PYH4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
HFM1A2PYH4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
HFM1A2PYH4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC32.46■■■□□ 2.79
HFM1A2PYH4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC32.46■■■□□ 2.79
HFM1A2PYH4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms