Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 pRNA.13-201ENST00000619112 90 ntBASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-2A0A075B6T6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAV12-2A0A075B6T6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 AL512631.2-201ENST00000604634 923 ntBASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 AL499627.2-201ENST00000606283 725 ntBASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-2A0A075B6T6 AC133637.1-201ENST00000624115 1537 ntBASIC16.14■□□□□ 0.18
TRAV12-2A0A075B6T6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV12-2A0A075B6T6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 AC139530.1-201ENST00000575312 1977 ntBASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-2A0A075B6T6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAV12-2A0A075B6T6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV12-2A0A075B6T6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-2A0A075B6T6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms