Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 AP000920.1-201ENST00000531824 344 ntBASIC11.08□□□□□ -0.64
NICN1Q9BSH3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 AC135983.4-201ENST00000564116 1262 ntBASIC11.08□□□□□ -0.64
NICN1Q9BSH3 AP000894.1-201ENST00000584430 520 ntBASIC11.08□□□□□ -0.64
NICN1Q9BSH3 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 AP000322.3-201ENST00000608665 388 ntBASIC11.08□□□□□ -0.64
NICN1Q9BSH3 CSTP2-201ENST00000610599 398 ntBASIC11.08□□□□□ -0.64
NICN1Q9BSH3 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 AC067852.6-201ENST00000591237 1736 ntBASIC11.08□□□□□ -0.64
NICN1Q9BSH3 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 STRADA-253ENST00000640979 2086 ntTSL 5 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NICN1Q9BSH3 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 THEMIS3P-201ENST00000416112 1586 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 KRT8P25-201ENST00000473150 1456 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AC068669.1-201ENST00000623793 2228 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 CALR4P-201ENST00000431943 946 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AL133466.1-201ENST00000447582 150 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 OR2A1-AS1-210ENST00000496968 531 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AL359219.1-201ENST00000556311 934 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 FGFR3P5-201ENST00000564496 886 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 RN7SL357P-201ENST00000581065 298 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AC100793.3-201ENST00000592440 719 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 CU633904.3-201ENST00000624042 1029 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 HLA-C-210ENST00000640219 976 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AC140481.3-201ENST00000450440 1762 ntTSL 2 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AP000350.6-201ENST00000609510 5637 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 AC012313.8-201ENST00000595059 5402 ntBASIC11.07□□□□□ -0.64
NICN1Q9BSH3 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NICN1Q9BSH3 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC11.06□□□□□ -0.64
NICN1Q9BSH3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.06□□□□□ -0.64
NICN1Q9BSH3 CASP7-203ENST00000369318 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms