Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AC120114.4-201ENST00000623731 2194 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 RNA5SP248-201ENST00000365602 127 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 CACYBPP3-201ENST00000406011 625 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 RN7SKP102-201ENST00000411186 315 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AHCYP3-201ENST00000420053 1279 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 MAGEA7P-201ENST00000436482 942 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AL356000.1-201ENST00000441073 1238 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 RNASEH2CP1-201ENST00000454281 502 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 RN7SL22P-201ENST00000471800 269 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AC026412.1-206ENST00000502273 206 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 HNRNPA1P55-201ENST00000505935 955 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AC079601.2-201ENST00000547729 775 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 RN7SL440P-201ENST00000577855 343 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AL031432.4-201ENST00000641729 2190 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 AL139385.1-201ENST00000611744 3272 ntBASIC11.77□□□□□ -0.53
NPIPA3F8WFD2 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 CYP2B7P-201ENST00000541697 1476 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AC018445.4-201ENST00000624066 2291 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 JAML-211ENST00000533261 1508 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 CTSL-202ENST00000342020 933 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AC098657.1-201ENST00000416270 1135 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 RFNG-202ENST00000429557 994 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AKR1C6P-201ENST00000432950 983 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 UGT1A12P-201ENST00000447084 853 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 RN7SL646P-201ENST00000492969 297 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 KRT18P63-201ENST00000505463 979 ntBASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NPIPA3F8WFD2 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms