Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA9Q9Y5H5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHA9Q9Y5H5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA9Q9Y5H5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHA9Q9Y5H5 MIR3621-201ENST00000580529 85 ntBASIC21.08■□□□□ 0.97
PCDHA9Q9Y5H5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHA9Q9Y5H5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDHA9Q9Y5H5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHA9Q9Y5H5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHA9Q9Y5H5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHA9Q9Y5H5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 DUX4L4-201ENST00000566884 1269 ntBASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 FBXW4P1-201ENST00000426721 2239 ntBASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHA9Q9Y5H5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDHA9Q9Y5H5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA9Q9Y5H5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA9Q9Y5H5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHA9Q9Y5H5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHA9Q9Y5H5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHA9Q9Y5H5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA9Q9Y5H5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCDHA9Q9Y5H5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA9Q9Y5H5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA9Q9Y5H5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA9Q9Y5H5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA9Q9Y5H5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHA9Q9Y5H5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHA9Q9Y5H5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHA9Q9Y5H5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHA9Q9Y5H5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHA9Q9Y5H5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHA9Q9Y5H5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA9Q9Y5H5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA9Q9Y5H5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA9Q9Y5H5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA9Q9Y5H5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHA9Q9Y5H5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
PCDHA9Q9Y5H5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA9Q9Y5H5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHA9Q9Y5H5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHA9Q9Y5H5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHA9Q9Y5H5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCDHA9Q9Y5H5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHA9Q9Y5H5 RASSF1-AS1-201ENST00000629828 790 ntBASIC21■□□□□ 0.95
PCDHA9Q9Y5H5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PCDHA9Q9Y5H5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHA9Q9Y5H5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms