Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 AL499627.2-201ENST00000606283 725 ntBASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 AL358852.1-201ENST00000623174 1268 ntBASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA6Q9Y5G7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA6Q9Y5G7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA6Q9Y5G7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA6Q9Y5G7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA6Q9Y5G7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGA6Q9Y5G7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA6Q9Y5G7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 ANOS2P-203ENST00000472227 1816 ntBASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 AC133637.1-201ENST00000624115 1537 ntBASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA6Q9Y5G7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
PCDHGA6Q9Y5G7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.02■□□□□ 0.95
PCDHGA6Q9Y5G7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 FP325331.1-202ENST00000623531 1380 ntBASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 AC027612.3-201ENST00000413684 1047 ntBASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA6Q9Y5G7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 MIR572-201ENST00000384983 95 ntBASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 AC123595.1-201ENST00000440769 1046 ntBASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21■□□□□ 0.95
PCDHGA6Q9Y5G7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA6Q9Y5G7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA6Q9Y5G7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA6Q9Y5G7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA6Q9Y5G7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA6Q9Y5G7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.99■□□□□ 0.95
PCDHGA6Q9Y5G7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA6Q9Y5G7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA6Q9Y5G7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 C1orf229-201ENST00000623686 2258 ntBASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 DUSP8P3-201ENST00000399571 1760 ntBASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 DUX4L4-201ENST00000566884 1269 ntBASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA6Q9Y5G7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms