Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 AC105233.4-201ENST00000642045 216 ntBASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA9Q9Y5G4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA9Q9Y5G4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 LINC01529-204ENST00000636474 1715 ntBASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 AC004812.2-201ENST00000611079 2094 ntBASIC20.46■□□□□ 0.87
PCDHGA9Q9Y5G4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
PCDHGA9Q9Y5G4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 AC144652.1-201ENST00000609974 1624 ntBASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA9Q9Y5G4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA9Q9Y5G4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA9Q9Y5G4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA9Q9Y5G4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms