Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 AC087742.1-201ENST00000575880 1738 ntBASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 AL137060.1-201ENST00000618151 2648 ntBASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 AC133561.4-201ENST00000566112 224 ntBASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.5■□□□□ 0.39
LSM4Q9Y4Z0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 AL512631.2-201ENST00000604634 923 ntBASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 AF131216.4-201ENST00000638924 1588 ntBASIC17.49■□□□□ 0.39
LSM4Q9Y4Z0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 AC004448.1-201ENST00000458332 883 ntBASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.48■□□□□ 0.39
LSM4Q9Y4Z0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 AL024507.2-201ENST00000606070 2574 ntBASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 FBXW4P1-201ENST00000426721 2239 ntBASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM4Q9Y4Z0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.46■□□□□ 0.39
LSM4Q9Y4Z0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LSM4Q9Y4Z0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM4Q9Y4Z0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM4Q9Y4Z0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LSM4Q9Y4Z0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM4Q9Y4Z0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM4Q9Y4Z0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM4Q9Y4Z0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms