Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 APTR-205ENST00000447009 902 ntTSL 2 BASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NRXN3Q9Y4C0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NRXN3Q9Y4C0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
NRXN3Q9Y4C0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NRXN3Q9Y4C0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
NRXN3Q9Y4C0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NRXN3Q9Y4C0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.23■■■□□ 2.59
NRXN3Q9Y4C0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NRXN3Q9Y4C0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NRXN3Q9Y4C0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
NRXN3Q9Y4C0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.22■■■□□ 2.59
NRXN3Q9Y4C0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.22■■■□□ 2.59
NRXN3Q9Y4C0 ESRRAP2-201ENST00000418437 1549 ntBASIC31.22■■■□□ 2.59
NRXN3Q9Y4C0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 AC079140.4-201ENST00000507448 529 ntBASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 UBE2DNL-204ENST00000602536 740 ntBASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC31.21■■■□□ 2.59
NRXN3Q9Y4C0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.2■■■□□ 2.59
NRXN3Q9Y4C0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.2■■■□□ 2.59
NRXN3Q9Y4C0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.2■■■□□ 2.59
NRXN3Q9Y4C0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
NRXN3Q9Y4C0 KRT87P-202ENST00000534226 1464 ntBASIC31.2■■■□□ 2.58
NRXN3Q9Y4C0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
NRXN3Q9Y4C0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NRXN3Q9Y4C0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NRXN3Q9Y4C0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
NRXN3Q9Y4C0 AC087239.1-201ENST00000622671 572 ntBASIC31.2■■■□□ 2.58
NRXN3Q9Y4C0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.19■■■□□ 2.58
NRXN3Q9Y4C0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NRXN3Q9Y4C0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NRXN3Q9Y4C0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NRXN3Q9Y4C0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.19■■■□□ 2.58
NRXN3Q9Y4C0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
NRXN3Q9Y4C0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
NRXN3Q9Y4C0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.18■■■□□ 2.58
NRXN3Q9Y4C0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC31.18■■■□□ 2.58
NRXN3Q9Y4C0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.18■■■□□ 2.58
NRXN3Q9Y4C0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 DUX4L16-201ENST00000555130 1264 ntBASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 AC104187.1-201ENST00000607510 612 ntBASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 H19-210ENST00000439725 1929 ntTSL 2 BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 AC005224.4-201ENST00000583262 1652 ntBASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
NRXN3Q9Y4C0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 AC098934.4-201ENST00000564127 592 ntBASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 GPX1P1-201ENST00000388829 606 ntBASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NRXN3Q9Y4C0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
NRXN3Q9Y4C0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC31.15■■■□□ 2.58
NRXN3Q9Y4C0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.15■■■□□ 2.58
NRXN3Q9Y4C0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
NRXN3Q9Y4C0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NRXN3Q9Y4C0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NRXN3Q9Y4C0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
NRXN3Q9Y4C0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.14■■■□□ 2.58
NRXN3Q9Y4C0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NRXN3Q9Y4C0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.14■■■□□ 2.58
NRXN3Q9Y4C0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.57
NRXN3Q9Y4C0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 MIR4651-201ENST00000582622 73 ntBASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
NRXN3Q9Y4C0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC31.12■■■□□ 2.57
NRXN3Q9Y4C0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms