Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 AL050303.2-201ENST00000619798 666 ntBASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.97■■■□□ 2.07
RTCBQ9Y3I0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 AC083906.2-201ENST00000511578 360 ntBASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 AC066615.1-201ENST00000640911 628 ntBASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTCBQ9Y3I0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC27.95■■■□□ 2.07
RTCBQ9Y3I0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RTCBQ9Y3I0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RTCBQ9Y3I0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
RTCBQ9Y3I0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.95■■■□□ 2.06
RTCBQ9Y3I0 OXCT2P1-201ENST00000447263 1535 ntBASIC27.95■■■□□ 2.06
RTCBQ9Y3I0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RTCBQ9Y3I0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RTCBQ9Y3I0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 TSPY6P-201ENST00000448518 926 ntBASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTCBQ9Y3I0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.93■■■□□ 2.06
RTCBQ9Y3I0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RTCBQ9Y3I0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RTCBQ9Y3I0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.93■■■□□ 2.06
RTCBQ9Y3I0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RTCBQ9Y3I0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RTCBQ9Y3I0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 AC079630.1-202ENST00000618127 1840 ntBASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 KRT18P6-201ENST00000555540 1265 ntBASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 AC231657.2-201ENST00000624556 255 ntBASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
RTCBQ9Y3I0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
RTCBQ9Y3I0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RTCBQ9Y3I0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.91■■■□□ 2.06
RTCBQ9Y3I0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.91■■■□□ 2.06
RTCBQ9Y3I0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.91■■■□□ 2.06
RTCBQ9Y3I0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.91■■■□□ 2.06
RTCBQ9Y3I0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RTCBQ9Y3I0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RTCBQ9Y3I0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.9■■■□□ 2.06
RTCBQ9Y3I0 AC104187.1-201ENST00000607510 612 ntBASIC27.9■■■□□ 2.06
RTCBQ9Y3I0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTCBQ9Y3I0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
RTCBQ9Y3I0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
RTCBQ9Y3I0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTCBQ9Y3I0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 GUSBP6-202ENST00000438529 1198 ntBASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 SLC7A5P2-201ENST00000553010 536 ntBASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 DUX4L16-201ENST00000555130 1264 ntBASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.89■■■□□ 2.06
RTCBQ9Y3I0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.05
RTCBQ9Y3I0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 AC138932.3-201ENST00000567634 1902 ntBASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms