Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 LINC01529-204ENST00000636474 1715 ntBASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 KRT18P24-201ENST00000344739 1156 ntBASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 THA1P-201ENST00000590384 1145 ntBASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EXOSC1Q9Y3B2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EXOSC1Q9Y3B2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 FP325331.1-202ENST00000623531 1380 ntBASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EXOSC1Q9Y3B2 AC005229.4-201ENST00000610085 2198 ntBASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 U85056.1-201ENST00000616429 682 ntBASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.54■□□□□ 0.72
EXOSC1Q9Y3B2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EXOSC1Q9Y3B2 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 AC009086.3-201ENST00000623486 1008 ntBASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EXOSC1Q9Y3B2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
EXOSC1Q9Y3B2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
EXOSC1Q9Y3B2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.52■□□□□ 0.71
EXOSC1Q9Y3B2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
EXOSC1Q9Y3B2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.52■□□□□ 0.71
EXOSC1Q9Y3B2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
EXOSC1Q9Y3B2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
EXOSC1Q9Y3B2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms