Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM2Q9Y333 AL157384.1-201ENST00000445995 2473 ntBASIC19.48■□□□□ 0.71
LSM2Q9Y333 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LSM2Q9Y333 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM2Q9Y333 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM2Q9Y333 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM2Q9Y333 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM2Q9Y333 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM2Q9Y333 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM2Q9Y333 AC019171.1-201ENST00000601251 1056 ntBASIC19.48■□□□□ 0.71
LSM2Q9Y333 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LSM2Q9Y333 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
LSM2Q9Y333 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
LSM2Q9Y333 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.47■□□□□ 0.71
LSM2Q9Y333 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 FEM1AP4-201ENST00000443167 1987 ntBASIC19.47■□□□□ 0.71
LSM2Q9Y333 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LSM2Q9Y333 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.47■□□□□ 0.71
LSM2Q9Y333 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSM2Q9Y333 AF106564.1-201ENST00000607058 2553 ntBASIC19.46■□□□□ 0.71
LSM2Q9Y333 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM2Q9Y333 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.46■□□□□ 0.71
LSM2Q9Y333 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.46■□□□□ 0.71
LSM2Q9Y333 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LSM2Q9Y333 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LSM2Q9Y333 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM2Q9Y333 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.46■□□□□ 0.71
LSM2Q9Y333 AC120024.1-201ENST00000562672 995 ntBASIC19.46■□□□□ 0.71
LSM2Q9Y333 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM2Q9Y333 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LSM2Q9Y333 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LSM2Q9Y333 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
LSM2Q9Y333 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM2Q9Y333 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM2Q9Y333 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM2Q9Y333 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM2Q9Y333 LINC01521-201ENST00000504184 1943 ntBASIC19.45■□□□□ 0.7
LSM2Q9Y333 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM2Q9Y333 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM2Q9Y333 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LSM2Q9Y333 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM2Q9Y333 RNF126P1-201ENST00000567452 1320 ntBASIC19.45■□□□□ 0.7
LSM2Q9Y333 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM2Q9Y333 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM2Q9Y333 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM2Q9Y333 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LSM2Q9Y333 LINC01529-204ENST00000636474 1715 ntBASIC19.45■□□□□ 0.7
LSM2Q9Y333 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM2Q9Y333 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM2Q9Y333 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM2Q9Y333 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM2Q9Y333 AC092667.1-201ENST00000434301 2586 ntBASIC19.44■□□□□ 0.7
LSM2Q9Y333 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM2Q9Y333 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
LSM2Q9Y333 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM2Q9Y333 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM2Q9Y333 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM2Q9Y333 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LSM2Q9Y333 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM2Q9Y333 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM2Q9Y333 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM2Q9Y333 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LSM2Q9Y333 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM2Q9Y333 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM2Q9Y333 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 MIR4281-201ENST00000580852 62 ntBASIC19.43■□□□□ 0.7
LSM2Q9Y333 CA15P2-201ENST00000611168 834 ntBASIC19.43■□□□□ 0.7
LSM2Q9Y333 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LSM2Q9Y333 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM2Q9Y333 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.43■□□□□ 0.7
LSM2Q9Y333 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM2Q9Y333 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM2Q9Y333 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM2Q9Y333 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
LSM2Q9Y333 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.42■□□□□ 0.7
LSM2Q9Y333 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM2Q9Y333 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM2Q9Y333 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM2Q9Y333 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LSM2Q9Y333 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.42■□□□□ 0.7
LSM2Q9Y333 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.42■□□□□ 0.7
LSM2Q9Y333 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LSM2Q9Y333 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms