Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 OXCT2P1-201ENST00000447263 1535 ntBASIC30.18■■■□□ 2.42
NINLQ9Y2I6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NINLQ9Y2I6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
NINLQ9Y2I6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NINLQ9Y2I6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
NINLQ9Y2I6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC30.16■■■□□ 2.42
NINLQ9Y2I6 AC022517.1-201ENST00000592429 346 ntBASIC30.16■■■□□ 2.42
NINLQ9Y2I6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.16■■■□□ 2.42
NINLQ9Y2I6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NINLQ9Y2I6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NINLQ9Y2I6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NINLQ9Y2I6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC30.16■■■□□ 2.42
NINLQ9Y2I6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NINLQ9Y2I6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
NINLQ9Y2I6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NINLQ9Y2I6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
NINLQ9Y2I6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.14■■■□□ 2.41
NINLQ9Y2I6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
NINLQ9Y2I6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.41
NINLQ9Y2I6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
NINLQ9Y2I6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 BX005040.4-201ENST00000637145 1518 ntBASIC30.12■■■□□ 2.41
NINLQ9Y2I6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NINLQ9Y2I6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC30.11■■■□□ 2.41
NINLQ9Y2I6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
NINLQ9Y2I6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NINLQ9Y2I6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.11■■■□□ 2.41
NINLQ9Y2I6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.11■■■□□ 2.41
NINLQ9Y2I6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NINLQ9Y2I6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
NINLQ9Y2I6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
NINLQ9Y2I6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.1■■■□□ 2.41
NINLQ9Y2I6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
NINLQ9Y2I6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.1■■■□□ 2.41
NINLQ9Y2I6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
NINLQ9Y2I6 AC092437.1-201ENST00000624794 1048 ntBASIC30.1■■■□□ 2.41
NINLQ9Y2I6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.1■■■□□ 2.41
NINLQ9Y2I6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.09■■■□□ 2.41
NINLQ9Y2I6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
NINLQ9Y2I6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC30.09■■■□□ 2.41
NINLQ9Y2I6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
NINLQ9Y2I6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
NINLQ9Y2I6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
NINLQ9Y2I6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
NINLQ9Y2I6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
NINLQ9Y2I6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.08■■■□□ 2.41
NINLQ9Y2I6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.07■■■□□ 2.4
NINLQ9Y2I6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC30.07■■■□□ 2.4
NINLQ9Y2I6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
NINLQ9Y2I6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC30.07■■■□□ 2.4
NINLQ9Y2I6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
NINLQ9Y2I6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NINLQ9Y2I6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
NINLQ9Y2I6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
NINLQ9Y2I6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NINLQ9Y2I6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms