Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 AC098934.4-201ENST00000564127 592 ntBASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 LINC01529-204ENST00000636474 1715 ntBASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 RPS2P52-201ENST00000469610 820 ntBASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
ZC3H4Q9UPT8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H4Q9UPT8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
ZC3H4Q9UPT8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H4Q9UPT8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H4Q9UPT8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.79■■□□□ 1.88
ZC3H4Q9UPT8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H4Q9UPT8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 MIR4758-201ENST00000577688 71 ntBASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 UBE2DNL-204ENST00000602536 740 ntBASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 KRT87P-202ENST00000534226 1464 ntBASIC26.78■■□□□ 1.88
ZC3H4Q9UPT8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H4Q9UPT8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
ZC3H4Q9UPT8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 AC098590.1-201ENST00000468126 897 ntBASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 AC105036.2-201ENST00000569468 176 ntBASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 AC104187.1-201ENST00000607510 612 ntBASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 MYCNOS-205ENST00000641950 531 ntBASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 AC144652.1-201ENST00000609974 1624 ntBASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H4Q9UPT8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ZC3H4Q9UPT8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZC3H4Q9UPT8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.75■■□□□ 1.87
ZC3H4Q9UPT8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.75■■□□□ 1.87
ZC3H4Q9UPT8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
ZC3H4Q9UPT8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3H4Q9UPT8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3H4Q9UPT8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3H4Q9UPT8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.74■■□□□ 1.87
ZC3H4Q9UPT8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.74■■□□□ 1.87
ZC3H4Q9UPT8 RNA5SP413-201ENST00000516373 109 ntBASIC26.74■■□□□ 1.87
ZC3H4Q9UPT8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3H4Q9UPT8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.74■■□□□ 1.87
ZC3H4Q9UPT8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 CNN2P6-201ENST00000439038 900 ntBASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 GCSHP5-201ENST00000443090 522 ntBASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.73■■□□□ 1.87
ZC3H4Q9UPT8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.72■■□□□ 1.87
ZC3H4Q9UPT8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms