Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.76■□□□□ 0.75
HINT3Q9NQE9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.76■□□□□ 0.75
HINT3Q9NQE9 AC005703.6-201ENST00000623265 1329 ntBASIC19.76■□□□□ 0.75
HINT3Q9NQE9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 LINC01960-201ENST00000563759 1884 ntBASIC19.75■□□□□ 0.75
HINT3Q9NQE9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 KRT16P3-201ENST00000439127 1283 ntBASIC19.75■□□□□ 0.75
HINT3Q9NQE9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HINT3Q9NQE9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.74■□□□□ 0.75
HINT3Q9NQE9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 MIR6722-201ENST00000617286 78 ntBASIC19.74■□□□□ 0.75
HINT3Q9NQE9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HINT3Q9NQE9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 MTDHP2-201ENST00000601468 714 ntBASIC19.73■□□□□ 0.75
HINT3Q9NQE9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HINT3Q9NQE9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 AC010997.5-201ENST00000609182 354 ntBASIC19.72■□□□□ 0.75
HINT3Q9NQE9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 AC010542.4-201ENST00000563151 1910 ntBASIC19.72■□□□□ 0.75
HINT3Q9NQE9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HINT3Q9NQE9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HINT3Q9NQE9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 DUX4L4-201ENST00000566884 1269 ntBASIC19.7■□□□□ 0.74
HINT3Q9NQE9 AC131212.1-201ENST00000613771 668 ntBASIC19.7■□□□□ 0.74
HINT3Q9NQE9 AC009086.3-201ENST00000623486 1008 ntBASIC19.7■□□□□ 0.74
HINT3Q9NQE9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 AC026310.3-201ENST00000625186 2373 ntBASIC19.7■□□□□ 0.74
HINT3Q9NQE9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms