Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 AC010997.5-201ENST00000609182 354 ntBASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 CA15P2-201ENST00000611168 834 ntBASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TUBB1Q9H4B7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBB1Q9H4B7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.14■□□□□ 0.98
TUBB1Q9H4B7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TUBB1Q9H4B7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBB1Q9H4B7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBB1Q9H4B7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.14■□□□□ 0.97
TUBB1Q9H4B7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
TUBB1Q9H4B7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.14■□□□□ 0.97
TUBB1Q9H4B7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB1Q9H4B7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBB1Q9H4B7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.14■□□□□ 0.97
TUBB1Q9H4B7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBB1Q9H4B7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 FAM99A-202ENST00000538190 1989 ntBASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 AC009299.2-201ENST00000482477 511 ntBASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.12■□□□□ 0.97
TUBB1Q9H4B7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 AC026310.3-201ENST00000625186 2373 ntBASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 TSPY9P-201ENST00000440215 945 ntBASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 TSPY11P-201ENST00000442607 1045 ntBASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.11■□□□□ 0.97
TUBB1Q9H4B7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.1■□□□□ 0.97
TUBB1Q9H4B7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 AL451085.2-201ENST00000605085 799 ntBASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 AL499627.2-201ENST00000606283 725 ntBASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TUBB1Q9H4B7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TUBB1Q9H4B7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TUBB1Q9H4B7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TUBB1Q9H4B7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.08■□□□□ 0.97
TUBB1Q9H4B7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TUBB1Q9H4B7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TUBB1Q9H4B7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TUBB1Q9H4B7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TUBB1Q9H4B7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms