Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 LINC01529-204ENST00000636474 1715 ntBASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 AC021242.3-201ENST00000607598 1377 ntBASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 AC009299.2-201ENST00000482477 511 ntBASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD3Q9BV44 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THUMPD3Q9BV44 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THUMPD3Q9BV44 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
THUMPD3Q9BV44 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.85■□□□□ 0.93
THUMPD3Q9BV44 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.85■□□□□ 0.93
THUMPD3Q9BV44 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THUMPD3Q9BV44 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
THUMPD3Q9BV44 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.84■□□□□ 0.93
THUMPD3Q9BV44 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.84■□□□□ 0.93
THUMPD3Q9BV44 Z92544.1-202ENST00000571933 1220 ntBASIC20.84■□□□□ 0.93
THUMPD3Q9BV44 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.84■□□□□ 0.93
THUMPD3Q9BV44 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THUMPD3Q9BV44 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 AC239859.2-201ENST00000444165 318 ntBASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 KRT125P-201ENST00000546827 989 ntBASIC20.83■□□□□ 0.93
THUMPD3Q9BV44 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
THUMPD3Q9BV44 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
THUMPD3Q9BV44 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
THUMPD3Q9BV44 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
THUMPD3Q9BV44 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD3Q9BV44 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 FP325331.1-202ENST00000623531 1380 ntBASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD3Q9BV44 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 MIR4787-201ENST00000607364 84 ntBASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
THUMPD3Q9BV44 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 AC005703.6-201ENST00000623265 1329 ntBASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms