Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BARD1Q99728 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BARD1Q99728 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.87■□□□□ 0.93
BARD1Q99728 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BARD1Q99728 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.87■□□□□ 0.93
BARD1Q99728 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BARD1Q99728 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BARD1Q99728 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BARD1Q99728 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BARD1Q99728 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BARD1Q99728 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BARD1Q99728 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BARD1Q99728 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BARD1Q99728 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
BARD1Q99728 RASA4CP-201ENST00000424092 1398 ntBASIC20.86■□□□□ 0.93
BARD1Q99728 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.86■□□□□ 0.93
BARD1Q99728 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BARD1Q99728 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.86■□□□□ 0.93
BARD1Q99728 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BARD1Q99728 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.86■□□□□ 0.93
BARD1Q99728 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BARD1Q99728 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.86■□□□□ 0.93
BARD1Q99728 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BARD1Q99728 MIR4767-201ENST00000582827 78 ntBASIC20.86■□□□□ 0.93
BARD1Q99728 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BARD1Q99728 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BARD1Q99728 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.86■□□□□ 0.93
BARD1Q99728 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.86■□□□□ 0.93
BARD1Q99728 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
BARD1Q99728 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 AC137767.1-201ENST00000602918 1920 ntBASIC20.85■□□□□ 0.93
BARD1Q99728 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BARD1Q99728 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.85■□□□□ 0.93
BARD1Q99728 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.85■□□□□ 0.93
BARD1Q99728 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.85■□□□□ 0.93
BARD1Q99728 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.85■□□□□ 0.93
BARD1Q99728 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BARD1Q99728 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.85■□□□□ 0.93
BARD1Q99728 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
BARD1Q99728 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BARD1Q99728 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BARD1Q99728 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BARD1Q99728 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BARD1Q99728 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BARD1Q99728 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BARD1Q99728 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.84■□□□□ 0.93
BARD1Q99728 AL138724.1-201ENST00000606771 1088 ntBASIC20.84■□□□□ 0.93
BARD1Q99728 CA15P2-201ENST00000611168 834 ntBASIC20.84■□□□□ 0.93
BARD1Q99728 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.84■□□□□ 0.93
BARD1Q99728 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.84■□□□□ 0.93
BARD1Q99728 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BARD1Q99728 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.83■□□□□ 0.93
BARD1Q99728 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.83■□□□□ 0.93
BARD1Q99728 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.83■□□□□ 0.93
BARD1Q99728 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
BARD1Q99728 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.83■□□□□ 0.92
BARD1Q99728 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.83■□□□□ 0.92
BARD1Q99728 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.83■□□□□ 0.92
BARD1Q99728 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BARD1Q99728 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BARD1Q99728 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 SERBP1P1-201ENST00000396021 1160 ntBASIC20.82■□□□□ 0.92
BARD1Q99728 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.82■□□□□ 0.92
BARD1Q99728 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.82■□□□□ 0.92
BARD1Q99728 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.82■□□□□ 0.92
BARD1Q99728 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.82■□□□□ 0.92
BARD1Q99728 AC011298.3-201ENST00000615796 283 ntBASIC20.82■□□□□ 0.92
BARD1Q99728 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.82■□□□□ 0.92
BARD1Q99728 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.82■□□□□ 0.92
BARD1Q99728 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.82■□□□□ 0.92
BARD1Q99728 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 AL022069.1-201ENST00000568025 1636 ntBASIC20.82■□□□□ 0.92
BARD1Q99728 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BARD1Q99728 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.81■□□□□ 0.92
BARD1Q99728 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.81■□□□□ 0.92
BARD1Q99728 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
BARD1Q99728 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BARD1Q99728 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.81■□□□□ 0.92
BARD1Q99728 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BARD1Q99728 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.81■□□□□ 0.92
BARD1Q99728 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.81■□□□□ 0.92
BARD1Q99728 AC087623.3-201ENST00000607047 1098 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms