Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.35■■■□□ 2.13
SMARCC1Q92922 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC1Q92922 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC1Q92922 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC1Q92922 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC1Q92922 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SMARCC1Q92922 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
SMARCC1Q92922 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
SMARCC1Q92922 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC1Q92922 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC1Q92922 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC1Q92922 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC1Q92922 AL121832.2-201ENST00000610979 668 ntBASIC28.34■■■□□ 2.13
SMARCC1Q92922 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.34■■■□□ 2.13
SMARCC1Q92922 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.34■■■□□ 2.13
SMARCC1Q92922 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC1Q92922 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SMARCC1Q92922 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
SMARCC1Q92922 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.33■■■□□ 2.13
SMARCC1Q92922 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.33■■■□□ 2.13
SMARCC1Q92922 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.33■■■□□ 2.13
SMARCC1Q92922 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SMARCC1Q92922 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.33■■■□□ 2.13
SMARCC1Q92922 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SMARCC1Q92922 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.12
SMARCC1Q92922 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SMARCC1Q92922 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
SMARCC1Q92922 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SMARCC1Q92922 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SMARCC1Q92922 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.32■■■□□ 2.12
SMARCC1Q92922 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.32■■■□□ 2.12
SMARCC1Q92922 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC28.32■■■□□ 2.12
SMARCC1Q92922 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.32■■■□□ 2.12
SMARCC1Q92922 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.32■■■□□ 2.12
SMARCC1Q92922 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMARCC1Q92922 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.31■■■□□ 2.12
SMARCC1Q92922 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMARCC1Q92922 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SMARCC1Q92922 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.31■■■□□ 2.12
SMARCC1Q92922 AC079630.1-202ENST00000618127 1840 ntBASIC28.31■■■□□ 2.12
SMARCC1Q92922 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SMARCC1Q92922 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.3■■■□□ 2.12
SMARCC1Q92922 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.3■■■□□ 2.12
SMARCC1Q92922 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SMARCC1Q92922 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.3■■■□□ 2.12
SMARCC1Q92922 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.3■■■□□ 2.12
SMARCC1Q92922 AL050303.2-201ENST00000619798 666 ntBASIC28.3■■■□□ 2.12
SMARCC1Q92922 AC231657.2-201ENST00000624556 255 ntBASIC28.3■■■□□ 2.12
SMARCC1Q92922 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.29■■■□□ 2.12
SMARCC1Q92922 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SMARCC1Q92922 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SMARCC1Q92922 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SMARCC1Q92922 AC083906.2-201ENST00000511578 360 ntBASIC28.29■■■□□ 2.12
SMARCC1Q92922 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC28.29■■■□□ 2.12
SMARCC1Q92922 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SMARCC1Q92922 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SMARCC1Q92922 AC142381.3-201ENST00000568208 1670 ntBASIC28.29■■■□□ 2.12
SMARCC1Q92922 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMARCC1Q92922 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMARCC1Q92922 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
SMARCC1Q92922 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMARCC1Q92922 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.28■■■□□ 2.12
SMARCC1Q92922 TSPY6P-201ENST00000448518 926 ntBASIC28.28■■■□□ 2.12
SMARCC1Q92922 MAZ-216ENST00000616501 991 ntTSL 5 BASIC28.28■■■□□ 2.12
SMARCC1Q92922 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.28■■■□□ 2.12
SMARCC1Q92922 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.28■■■□□ 2.12
SMARCC1Q92922 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SMARCC1Q92922 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.28■■■□□ 2.12
SMARCC1Q92922 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.27■■■□□ 2.12
SMARCC1Q92922 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC1Q92922 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC1Q92922 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC1Q92922 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC1Q92922 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SMARCC1Q92922 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
SMARCC1Q92922 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SMARCC1Q92922 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SMARCC1Q92922 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SMARCC1Q92922 AC138932.3-201ENST00000567634 1902 ntBASIC28.26■■■□□ 2.11
SMARCC1Q92922 USP45-205ENST00000472914 1617 ntTSL 5 BASIC28.26■■■□□ 2.11
SMARCC1Q92922 AC104187.1-201ENST00000607510 612 ntBASIC28.26■■■□□ 2.11
SMARCC1Q92922 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.26■■■□□ 2.11
SMARCC1Q92922 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.26■■■□□ 2.11
SMARCC1Q92922 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SMARCC1Q92922 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.25■■■□□ 2.11
SMARCC1Q92922 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.25■■■□□ 2.11
SMARCC1Q92922 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.25■■■□□ 2.11
SMARCC1Q92922 DUX4L16-201ENST00000555130 1264 ntBASIC28.25■■■□□ 2.11
SMARCC1Q92922 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.25■■■□□ 2.11
SMARCC1Q92922 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 KRT87P-202ENST00000534226 1464 ntBASIC28.25■■■□□ 2.11
SMARCC1Q92922 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SMARCC1Q92922 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms