Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB40AQ8WXH6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB40AQ8WXH6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 AC080038.3-201ENST00000623346 1952 ntBASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB40AQ8WXH6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RAB40AQ8WXH6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 MIR6724-1-201ENST00000616420 92 ntBASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 MIR6724-2-201ENST00000616483 92 ntBASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 MIR6724-4-201ENST00000617390 92 ntBASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 MIR6724-3-201ENST00000622482 92 ntBASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40AQ8WXH6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
RAB40AQ8WXH6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.14■□□□□ 0.66
RAB40AQ8WXH6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB40AQ8WXH6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB40AQ8WXH6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB40AQ8WXH6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RAB40AQ8WXH6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RAB40AQ8WXH6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40AQ8WXH6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB40AQ8WXH6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.14■□□□□ 0.65
RAB40AQ8WXH6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.14■□□□□ 0.65
RAB40AQ8WXH6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40AQ8WXH6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40AQ8WXH6 AL353803.4-201ENST00000565882 1934 ntBASIC19.13■□□□□ 0.65
RAB40AQ8WXH6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40AQ8WXH6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RAB40AQ8WXH6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40AQ8WXH6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB40AQ8WXH6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.13■□□□□ 0.65
RAB40AQ8WXH6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB40AQ8WXH6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40AQ8WXH6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB40AQ8WXH6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
RAB40AQ8WXH6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms