Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTN4IP1Q8WWV3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 MTDHP2-201ENST00000601468 714 ntBASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4IP1Q8WWV3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 TSPY9P-201ENST00000440215 945 ntBASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 TSPY11P-201ENST00000442607 1045 ntBASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 AC005703.6-201ENST00000623265 1329 ntBASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4IP1Q8WWV3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4IP1Q8WWV3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4IP1Q8WWV3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4IP1Q8WWV3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4IP1Q8WWV3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4IP1Q8WWV3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4IP1Q8WWV3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4IP1Q8WWV3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 AC010997.5-201ENST00000609182 354 ntBASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4IP1Q8WWV3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.32■□□□□ 0.52
RTN4IP1Q8WWV3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms