Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 CA15P2-201ENST00000611168 834 ntBASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC44A1Q8WWI5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC44A1Q8WWI5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 AL024507.2-201ENST00000606070 2574 ntBASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC44A1Q8WWI5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.95■■□□□ 1.11
SLC44A1Q8WWI5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
SLC44A1Q8WWI5 AC004687.1-201ENST00000579003 1625 ntBASIC21.95■■□□□ 1.1
SLC44A1Q8WWI5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC44A1Q8WWI5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC44A1Q8WWI5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC44A1Q8WWI5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SLC44A1Q8WWI5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC44A1Q8WWI5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC44A1Q8WWI5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC44A1Q8WWI5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.94■■□□□ 1.1
SLC44A1Q8WWI5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC44A1Q8WWI5 AC009102.2-201ENST00000606772 1639 ntBASIC21.94■■□□□ 1.1
SLC44A1Q8WWI5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC44A1Q8WWI5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLC44A1Q8WWI5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC44A1Q8WWI5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC44A1Q8WWI5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 BX664725.1-201ENST00000438252 379 ntBASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC44A1Q8WWI5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms