Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GPX1P1-201ENST00000388829 606 ntBASIC27.02■■□□□ 1.92
SNED1Q8TER0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.02■■□□□ 1.92
SNED1Q8TER0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.02■■□□□ 1.92
SNED1Q8TER0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.02■■□□□ 1.92
SNED1Q8TER0 SLC7A5P2-201ENST00000553010 536 ntBASIC27.02■■□□□ 1.92
SNED1Q8TER0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNED1Q8TER0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNED1Q8TER0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNED1Q8TER0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNED1Q8TER0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.01■■□□□ 1.91
SNED1Q8TER0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNED1Q8TER0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SNED1Q8TER0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.01■■□□□ 1.91
SNED1Q8TER0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNED1Q8TER0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
SNED1Q8TER0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNED1Q8TER0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
SNED1Q8TER0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
SNED1Q8TER0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27■■□□□ 1.91
SNED1Q8TER0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27■■□□□ 1.91
SNED1Q8TER0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27■■□□□ 1.91
SNED1Q8TER0 TMEM191A-211ENST00000637163 1067 ntBASIC27■■□□□ 1.91
SNED1Q8TER0 AC068587.7-201ENST00000641602 218 ntBASIC27■■□□□ 1.91
SNED1Q8TER0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27■■□□□ 1.91
SNED1Q8TER0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
SNED1Q8TER0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
SNED1Q8TER0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SNED1Q8TER0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.99■■□□□ 1.91
SNED1Q8TER0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SNED1Q8TER0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
SNED1Q8TER0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SNED1Q8TER0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SNED1Q8TER0 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.99■■□□□ 1.91
SNED1Q8TER0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.99■■□□□ 1.91
SNED1Q8TER0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SNED1Q8TER0 AC004687.1-201ENST00000579003 1625 ntBASIC26.98■■□□□ 1.91
SNED1Q8TER0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SNED1Q8TER0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.98■■□□□ 1.91
SNED1Q8TER0 CD99P1-205ENST00000527459 561 ntBASIC26.98■■□□□ 1.91
SNED1Q8TER0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SNED1Q8TER0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.97■■□□□ 1.91
SNED1Q8TER0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SNED1Q8TER0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SNED1Q8TER0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.97■■□□□ 1.91
SNED1Q8TER0 TSPY6P-201ENST00000448518 926 ntBASIC26.97■■□□□ 1.91
SNED1Q8TER0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.97■■□□□ 1.91
SNED1Q8TER0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.97■■□□□ 1.91
SNED1Q8TER0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.97■■□□□ 1.91
SNED1Q8TER0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SNED1Q8TER0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNED1Q8TER0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNED1Q8TER0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNED1Q8TER0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SNED1Q8TER0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 AC010141.3-201ENST00000456659 717 ntBASIC26.96■■□□□ 1.91
SNED1Q8TER0 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.96■■□□□ 1.91
SNED1Q8TER0 AC066615.1-201ENST00000640911 628 ntBASIC26.96■■□□□ 1.91
SNED1Q8TER0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.95■■□□□ 1.91
SNED1Q8TER0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.95■■□□□ 1.91
SNED1Q8TER0 AC079630.1-202ENST00000618127 1840 ntBASIC26.95■■□□□ 1.91
SNED1Q8TER0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SNED1Q8TER0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNED1Q8TER0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
SNED1Q8TER0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNED1Q8TER0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.95■■□□□ 1.9
SNED1Q8TER0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SNED1Q8TER0 AC079140.4-201ENST00000507448 529 ntBASIC26.95■■□□□ 1.9
SNED1Q8TER0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNED1Q8TER0 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.95■■□□□ 1.9
SNED1Q8TER0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.95■■□□□ 1.9
SNED1Q8TER0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNED1Q8TER0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.94■■□□□ 1.9
SNED1Q8TER0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.94■■□□□ 1.9
SNED1Q8TER0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.94■■□□□ 1.9
SNED1Q8TER0 DUX4L16-201ENST00000555130 1264 ntBASIC26.94■■□□□ 1.9
SNED1Q8TER0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.94■■□□□ 1.9
SNED1Q8TER0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNED1Q8TER0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
SNED1Q8TER0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNED1Q8TER0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.93■■□□□ 1.9
SNED1Q8TER0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SNED1Q8TER0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNED1Q8TER0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SNED1Q8TER0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.93■■□□□ 1.9
SNED1Q8TER0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.93■■□□□ 1.9
SNED1Q8TER0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.93■■□□□ 1.9
SNED1Q8TER0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SNED1Q8TER0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNED1Q8TER0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms