Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.76■■□□□ 1.23
CCHCR1Q8TD31 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 PKD1P6-201ENST00000343738 4769 ntBASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCHCR1Q8TD31 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 AC131212.1-201ENST00000613771 668 ntBASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCHCR1Q8TD31 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 AC080038.3-201ENST00000623346 1952 ntBASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 AL117332.1-201ENST00000622628 974 ntBASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCHCR1Q8TD31 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCHCR1Q8TD31 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCHCR1Q8TD31 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
CCHCR1Q8TD31 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCHCR1Q8TD31 MIR3621-201ENST00000580529 85 ntBASIC22.71■■□□□ 1.23
CCHCR1Q8TD31 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCHCR1Q8TD31 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCHCR1Q8TD31 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCHCR1Q8TD31 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CCHCR1Q8TD31 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.7■■□□□ 1.22
CCHCR1Q8TD31 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 AC009086.3-201ENST00000623486 1008 ntBASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCHCR1Q8TD31 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCHCR1Q8TD31 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms