Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AP003097.1-201ENST00000530657 1135 ntBASIC20.23■□□□□ 0.83
CHD6Q8TD26 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD6Q8TD26 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD6Q8TD26 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD6Q8TD26 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD6Q8TD26 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD6Q8TD26 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD6Q8TD26 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD6Q8TD26 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD6Q8TD26 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD6Q8TD26 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD6Q8TD26 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD6Q8TD26 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CHD6Q8TD26 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD6Q8TD26 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD6Q8TD26 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD6Q8TD26 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 AC012618.2-201ENST00000428058 849 ntBASIC20.21■□□□□ 0.83
CHD6Q8TD26 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 AC133561.5-201ENST00000635547 218 ntBASIC20.21■□□□□ 0.83
CHD6Q8TD26 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD6Q8TD26 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD6Q8TD26 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD6Q8TD26 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD6Q8TD26 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD6Q8TD26 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD6Q8TD26 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD6Q8TD26 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD6Q8TD26 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHD6Q8TD26 AC142472.1-201ENST00000612013 1741 ntBASIC20.2■□□□□ 0.82
CHD6Q8TD26 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHD6Q8TD26 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD6Q8TD26 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CHD6Q8TD26 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD6Q8TD26 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD6Q8TD26 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD6Q8TD26 RPPH1-201ENST00000516869 333 ntBASIC20.19■□□□□ 0.82
CHD6Q8TD26 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD6Q8TD26 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD6Q8TD26 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD6Q8TD26 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD6Q8TD26 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD6Q8TD26 BX276092.2-201ENST00000417668 665 ntBASIC20.19■□□□□ 0.82
CHD6Q8TD26 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CHD6Q8TD26 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CHD6Q8TD26 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD6Q8TD26 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD6Q8TD26 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.18■□□□□ 0.82
CHD6Q8TD26 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD6Q8TD26 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.18■□□□□ 0.82
CHD6Q8TD26 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD6Q8TD26 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD6Q8TD26 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD6Q8TD26 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD6Q8TD26 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.18■□□□□ 0.82
CHD6Q8TD26 AC092865.7-201ENST00000641832 219 ntBASIC20.18■□□□□ 0.82
CHD6Q8TD26 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD6Q8TD26 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.18■□□□□ 0.82
CHD6Q8TD26 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHD6Q8TD26 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD6Q8TD26 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD6Q8TD26 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CHD6Q8TD26 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD6Q8TD26 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD6Q8TD26 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD6Q8TD26 AL049597.2-201ENST00000565575 961 ntBASIC20.17■□□□□ 0.82
CHD6Q8TD26 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD6Q8TD26 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD6Q8TD26 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD6Q8TD26 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD6Q8TD26 AC091874.3-201ENST00000512672 1195 ntBASIC20.16■□□□□ 0.82
CHD6Q8TD26 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CHD6Q8TD26 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CHD6Q8TD26 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD6Q8TD26 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD6Q8TD26 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD6Q8TD26 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD6Q8TD26 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD6Q8TD26 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD6Q8TD26 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD6Q8TD26 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD6Q8TD26 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 AC013268.1-206ENST00000638368 961 ntBASIC20.15■□□□□ 0.82
CHD6Q8TD26 AC112229.1-201ENST00000639295 961 ntBASIC20.15■□□□□ 0.82
CHD6Q8TD26 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD6Q8TD26 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD6Q8TD26 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 AC097658.1-201ENST00000475555 843 ntBASIC20.15■□□□□ 0.82
CHD6Q8TD26 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms