Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RDH11Q8TC12 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.55■■□□□ 1.04
RDH11Q8TC12 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RDH11Q8TC12 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RDH11Q8TC12 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.55■■□□□ 1.04
RDH11Q8TC12 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RDH11Q8TC12 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RDH11Q8TC12 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.54■■□□□ 1.04
RDH11Q8TC12 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 AL137060.1-201ENST00000618151 2648 ntBASIC21.54■■□□□ 1.04
RDH11Q8TC12 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RDH11Q8TC12 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RDH11Q8TC12 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 AC004687.1-201ENST00000579003 1625 ntBASIC21.53■■□□□ 1.04
RDH11Q8TC12 AC009102.2-201ENST00000606772 1639 ntBASIC21.53■■□□□ 1.04
RDH11Q8TC12 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RDH11Q8TC12 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
RDH11Q8TC12 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RDH11Q8TC12 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RDH11Q8TC12 FAM99A-202ENST00000538190 1989 ntBASIC21.52■■□□□ 1.04
RDH11Q8TC12 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RDH11Q8TC12 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RDH11Q8TC12 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RDH11Q8TC12 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.52■■□□□ 1.04
RDH11Q8TC12 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RDH11Q8TC12 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.52■■□□□ 1.04
RDH11Q8TC12 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RDH11Q8TC12 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
RDH11Q8TC12 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.52■■□□□ 1.04
RDH11Q8TC12 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RDH11Q8TC12 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RDH11Q8TC12 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.52■■□□□ 1.03
RDH11Q8TC12 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RDH11Q8TC12 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.52■■□□□ 1.03
RDH11Q8TC12 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RDH11Q8TC12 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.51■■□□□ 1.03
RDH11Q8TC12 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RDH11Q8TC12 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.51■■□□□ 1.03
RDH11Q8TC12 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
RDH11Q8TC12 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.51■■□□□ 1.03
RDH11Q8TC12 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.51■■□□□ 1.03
RDH11Q8TC12 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RDH11Q8TC12 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RDH11Q8TC12 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RDH11Q8TC12 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RDH11Q8TC12 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RDH11Q8TC12 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.5■■□□□ 1.03
RDH11Q8TC12 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
RDH11Q8TC12 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.5■■□□□ 1.03
RDH11Q8TC12 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RDH11Q8TC12 AC026310.3-201ENST00000625186 2373 ntBASIC21.5■■□□□ 1.03
RDH11Q8TC12 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RDH11Q8TC12 AC092028.1-203ENST00000608262 953 ntBASIC21.5■■□□□ 1.03
RDH11Q8TC12 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RDH11Q8TC12 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RDH11Q8TC12 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RDH11Q8TC12 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.5■■□□□ 1.03
RDH11Q8TC12 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.5■■□□□ 1.03
RDH11Q8TC12 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RDH11Q8TC12 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.49■■□□□ 1.03
RDH11Q8TC12 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RDH11Q8TC12 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RDH11Q8TC12 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.49■■□□□ 1.03
RDH11Q8TC12 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.49■■□□□ 1.03
RDH11Q8TC12 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RDH11Q8TC12 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.49■■□□□ 1.03
RDH11Q8TC12 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RDH11Q8TC12 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RDH11Q8TC12 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RDH11Q8TC12 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RDH11Q8TC12 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RDH11Q8TC12 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.48■■□□□ 1.03
RDH11Q8TC12 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RDH11Q8TC12 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
RDH11Q8TC12 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.48■■□□□ 1.03
RDH11Q8TC12 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms