Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 DUSP8P4-201ENST00000399538 1761 ntBASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 AC079140.4-201ENST00000507448 529 ntBASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 AC144652.1-201ENST00000609974 1624 ntBASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNIP1Q8TAD8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 SLC29A4P1-201ENST00000398760 971 ntBASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 AC068587.7-201ENST00000641602 218 ntBASIC20.72■□□□□ 0.91
SNIP1Q8TAD8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 AL138781.1-201ENST00000566567 1274 ntBASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 AC005181.1-201ENST00000604782 1256 ntBASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.71■□□□□ 0.91
SNIP1Q8TAD8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 AC007322.1-201ENST00000426983 750 ntBASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 AC069152.1-201ENST00000438030 544 ntBASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNIP1Q8TAD8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 SMUG1P1-201ENST00000590640 811 ntBASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNIP1Q8TAD8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 AC073210.2-201ENST00000430369 194 ntBASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 DUX4L16-201ENST00000555130 1264 ntBASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 AC133041.1-202ENST00000642053 222 ntBASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNIP1Q8TAD8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms