Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZIC4Q8N9L1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.45■□□□□ 0.7
ZIC4Q8N9L1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ZIC4Q8N9L1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.45■□□□□ 0.7
ZIC4Q8N9L1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.45■□□□□ 0.7
ZIC4Q8N9L1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZIC4Q8N9L1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZIC4Q8N9L1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 AC099791.1-201ENST00000416440 715 ntBASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 AP005435.1-201ENST00000529293 1178 ntBASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZIC4Q8N9L1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 AC027682.1-201ENST00000562846 899 ntBASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 CA15P2-201ENST00000611168 834 ntBASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 AC068587.7-201ENST00000641602 218 ntBASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZIC4Q8N9L1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 RASA4CP-201ENST00000424092 1398 ntBASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZIC4Q8N9L1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
ZIC4Q8N9L1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 AC127496.7-201ENST00000625110 1798 ntBASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 AC091305.1-201ENST00000479476 895 ntBASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 AC142381.2-201ENST00000566120 298 ntBASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 AC126544.1-201ENST00000580842 1059 ntBASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 AC233723.2-201ENST00000623798 2106 ntBASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZIC4Q8N9L1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZIC4Q8N9L1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC4Q8N9L1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC4Q8N9L1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.39■□□□□ 0.69
ZIC4Q8N9L1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ZIC4Q8N9L1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZIC4Q8N9L1 AC137767.1-201ENST00000602918 1920 ntBASIC19.39■□□□□ 0.69
ZIC4Q8N9L1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.39■□□□□ 0.69
ZIC4Q8N9L1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 AC010141.3-201ENST00000456659 717 ntBASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZIC4Q8N9L1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms