Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EXD3Q8N9H8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
EXD3Q8N9H8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 NCF1B-203ENST00000435988 1254 ntBASIC20.61■□□□□ 0.89
EXD3Q8N9H8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 AC105233.4-201ENST00000642045 216 ntBASIC20.61■□□□□ 0.89
EXD3Q8N9H8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.61■□□□□ 0.89
EXD3Q8N9H8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 DUSP8P5-201ENST00000422884 1815 ntBASIC20.6■□□□□ 0.89
EXD3Q8N9H8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 CD99P1-205ENST00000527459 561 ntBASIC20.6■□□□□ 0.89
EXD3Q8N9H8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 BID-214ENST00000617586 542 ntTSL 5 BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXD3Q8N9H8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EXD3Q8N9H8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 TSPY20P-201ENST00000450910 630 ntBASIC20.58■□□□□ 0.89
EXD3Q8N9H8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXD3Q8N9H8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EXD3Q8N9H8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
EXD3Q8N9H8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 AC068473.5-201ENST00000616428 2072 ntBASIC20.57■□□□□ 0.88
EXD3Q8N9H8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EXD3Q8N9H8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms