Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 TSPY26P-201ENST00000476365 1326 ntBASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 MIR935-201ENST00000401179 91 ntBASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.34■■□□□ 1.17
PCDH20Q8N6Y1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 IRS3P-201ENST00000223076 1006 ntBASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH20Q8N6Y1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDH20Q8N6Y1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH20Q8N6Y1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH20Q8N6Y1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH20Q8N6Y1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH20Q8N6Y1 DUSP8P3-201ENST00000399571 1760 ntBASIC22.33■■□□□ 1.16
PCDH20Q8N6Y1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 AC068587.7-201ENST00000641602 218 ntBASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH20Q8N6Y1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH20Q8N6Y1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH20Q8N6Y1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH20Q8N6Y1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PCDH20Q8N6Y1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH20Q8N6Y1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH20Q8N6Y1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH20Q8N6Y1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH20Q8N6Y1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PCDH20Q8N6Y1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH20Q8N6Y1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 AL031602.1-201ENST00000633169 911 ntBASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH20Q8N6Y1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms