Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PGBD3Q8N328 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.25■■□□□ 1.15
PGBD3Q8N328 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.25■■□□□ 1.15
PGBD3Q8N328 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PGBD3Q8N328 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.25■■□□□ 1.15
PGBD3Q8N328 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGBD3Q8N328 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PGBD3Q8N328 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PGBD3Q8N328 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGBD3Q8N328 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PGBD3Q8N328 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PGBD3Q8N328 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGBD3Q8N328 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PGBD3Q8N328 ID1-201ENST00000376105 1233 ntBASIC22.24■■□□□ 1.15
PGBD3Q8N328 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.24■■□□□ 1.15
PGBD3Q8N328 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.24■■□□□ 1.15
PGBD3Q8N328 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.24■■□□□ 1.15
PGBD3Q8N328 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
PGBD3Q8N328 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PGBD3Q8N328 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGBD3Q8N328 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGBD3Q8N328 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PGBD3Q8N328 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PGBD3Q8N328 AC016769.1-201ENST00000409132 1010 ntBASIC22.23■■□□□ 1.15
PGBD3Q8N328 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.23■■□□□ 1.15
PGBD3Q8N328 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PGBD3Q8N328 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.22■■□□□ 1.15
PGBD3Q8N328 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PGBD3Q8N328 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PGBD3Q8N328 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PGBD3Q8N328 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.22■■□□□ 1.15
PGBD3Q8N328 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.22■■□□□ 1.15
PGBD3Q8N328 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PGBD3Q8N328 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGBD3Q8N328 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGBD3Q8N328 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGBD3Q8N328 AC004687.1-201ENST00000579003 1625 ntBASIC22.21■■□□□ 1.15
PGBD3Q8N328 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGBD3Q8N328 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PGBD3Q8N328 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGBD3Q8N328 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.21■■□□□ 1.15
PGBD3Q8N328 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGBD3Q8N328 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGBD3Q8N328 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGBD3Q8N328 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.21■■□□□ 1.15
PGBD3Q8N328 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.2■■□□□ 1.15
PGBD3Q8N328 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PGBD3Q8N328 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PGBD3Q8N328 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
PGBD3Q8N328 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PGBD3Q8N328 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PGBD3Q8N328 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PGBD3Q8N328 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PGBD3Q8N328 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.2■■□□□ 1.14
PGBD3Q8N328 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.2■■□□□ 1.14
PGBD3Q8N328 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.2■■□□□ 1.14
PGBD3Q8N328 AC137761.2-201ENST00000561729 223 ntBASIC22.2■■□□□ 1.14
PGBD3Q8N328 AC145350.3-201ENST00000569033 163 ntBASIC22.2■■□□□ 1.14
PGBD3Q8N328 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.2■■□□□ 1.14
PGBD3Q8N328 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.2■■□□□ 1.14
PGBD3Q8N328 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PGBD3Q8N328 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGBD3Q8N328 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PGBD3Q8N328 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGBD3Q8N328 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PGBD3Q8N328 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PGBD3Q8N328 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.19■■□□□ 1.14
PGBD3Q8N328 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.19■■□□□ 1.14
PGBD3Q8N328 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PGBD3Q8N328 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGBD3Q8N328 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGBD3Q8N328 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGBD3Q8N328 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PGBD3Q8N328 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PGBD3Q8N328 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.18■■□□□ 1.14
PGBD3Q8N328 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGBD3Q8N328 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
PGBD3Q8N328 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.18■■□□□ 1.14
PGBD3Q8N328 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PGBD3Q8N328 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGBD3Q8N328 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGBD3Q8N328 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PGBD3Q8N328 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PGBD3Q8N328 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PGBD3Q8N328 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PGBD3Q8N328 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
PGBD3Q8N328 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PGBD3Q8N328 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PGBD3Q8N328 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.17■■□□□ 1.14
PGBD3Q8N328 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PGBD3Q8N328 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.17■■□□□ 1.14
PGBD3Q8N328 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms