Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 YBX1P1-201ENST00000445822 960 ntBASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCN4BQ8IWT1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCN4BQ8IWT1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.12■■□□□ 1.29
SCN4BQ8IWT1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.12■■□□□ 1.29
SCN4BQ8IWT1 AC010141.3-201ENST00000456659 717 ntBASIC23.12■■□□□ 1.29
SCN4BQ8IWT1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 AC027612.3-201ENST00000413684 1047 ntBASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCN4BQ8IWT1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 DUSP8P3-201ENST00000399571 1760 ntBASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCN4BQ8IWT1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.09■■□□□ 1.29
SCN4BQ8IWT1 AL162430.1-201ENST00000480705 870 ntBASIC23.08■■□□□ 1.29
SCN4BQ8IWT1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.08■■□□□ 1.29
SCN4BQ8IWT1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.08■■□□□ 1.29
SCN4BQ8IWT1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
SCN4BQ8IWT1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SCN4BQ8IWT1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCN4BQ8IWT1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SCN4BQ8IWT1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SCN4BQ8IWT1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 AC092666.2-201ENST00000613287 246 ntBASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SCN4BQ8IWT1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SCN4BQ8IWT1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SCN4BQ8IWT1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SCN4BQ8IWT1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SCN4BQ8IWT1 AC034268.1-201ENST00000441047 882 ntBASIC23.06■■□□□ 1.28
SCN4BQ8IWT1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SCN4BQ8IWT1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SCN4BQ8IWT1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SCN4BQ8IWT1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCN4BQ8IWT1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCN4BQ8IWT1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.05■■□□□ 1.28
SCN4BQ8IWT1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.05■■□□□ 1.28
SCN4BQ8IWT1 AC123595.1-201ENST00000440769 1046 ntBASIC23.05■■□□□ 1.28
SCN4BQ8IWT1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SCN4BQ8IWT1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SCN4BQ8IWT1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
SCN4BQ8IWT1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms