Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
COL23A1Q86Y22 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.95■■■□□ 2.06
COL23A1Q86Y22 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.94■■■□□ 2.06
COL23A1Q86Y22 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
COL23A1Q86Y22 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
COL23A1Q86Y22 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
COL23A1Q86Y22 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.93■■■□□ 2.06
COL23A1Q86Y22 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL23A1Q86Y22 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.93■■■□□ 2.06
COL23A1Q86Y22 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL23A1Q86Y22 AC068587.7-201ENST00000641602 218 ntBASIC27.93■■■□□ 2.06
COL23A1Q86Y22 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL23A1Q86Y22 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 ITM2C-210ENST00000620962 501 ntBASIC27.92■■■□□ 2.06
COL23A1Q86Y22 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
COL23A1Q86Y22 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
COL23A1Q86Y22 AC010141.3-201ENST00000456659 717 ntBASIC27.91■■■□□ 2.06
COL23A1Q86Y22 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
COL23A1Q86Y22 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.91■■■□□ 2.06
COL23A1Q86Y22 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
COL23A1Q86Y22 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.91■■■□□ 2.06
COL23A1Q86Y22 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
COL23A1Q86Y22 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
COL23A1Q86Y22 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL23A1Q86Y22 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.9■■■□□ 2.06
COL23A1Q86Y22 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
COL23A1Q86Y22 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.9■■■□□ 2.06
COL23A1Q86Y22 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
COL23A1Q86Y22 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC27.9■■■□□ 2.06
COL23A1Q86Y22 AL121749.1-202ENST00000609313 2153 ntBASIC27.9■■■□□ 2.06
COL23A1Q86Y22 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL23A1Q86Y22 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
COL23A1Q86Y22 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
COL23A1Q86Y22 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.89■■■□□ 2.06
COL23A1Q86Y22 PRORSD1P-201ENST00000295112 541 ntBASIC27.89■■■□□ 2.06
COL23A1Q86Y22 AF201337.1-201ENST00000520239 748 ntBASIC27.89■■■□□ 2.06
COL23A1Q86Y22 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.89■■■□□ 2.06
COL23A1Q86Y22 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
COL23A1Q86Y22 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
COL23A1Q86Y22 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC27.88■■■□□ 2.05
COL23A1Q86Y22 AC004687.1-201ENST00000579003 1625 ntBASIC27.88■■■□□ 2.05
COL23A1Q86Y22 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
COL23A1Q86Y22 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.87■■■□□ 2.05
COL23A1Q86Y22 CNN2P6-201ENST00000439038 900 ntBASIC27.87■■■□□ 2.05
COL23A1Q86Y22 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
COL23A1Q86Y22 AC105036.2-201ENST00000569468 176 ntBASIC27.87■■■□□ 2.05
COL23A1Q86Y22 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.87■■■□□ 2.05
COL23A1Q86Y22 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.87■■■□□ 2.05
COL23A1Q86Y22 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
COL23A1Q86Y22 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 KRT18P29-201ENST00000397031 1267 ntBASIC27.86■■■□□ 2.05
COL23A1Q86Y22 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 BRI3-207ENST00000539286 699 ntTSL 2 BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL23A1Q86Y22 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 KRT87P-202ENST00000534226 1464 ntBASIC27.85■■■□□ 2.05
COL23A1Q86Y22 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 MYCNOS-205ENST00000641950 531 ntBASIC27.85■■■□□ 2.05
COL23A1Q86Y22 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.85■■■□□ 2.05
COL23A1Q86Y22 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL23A1Q86Y22 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL23A1Q86Y22 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL23A1Q86Y22 RPS2P52-201ENST00000469610 820 ntBASIC27.84■■■□□ 2.05
COL23A1Q86Y22 AC133552.2-202ENST00000575694 574 ntBASIC27.84■■■□□ 2.05
COL23A1Q86Y22 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms