Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF180Q86T96 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RNF180Q86T96 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RNF180Q86T96 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.51■■□□□ 1.51
RNF180Q86T96 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RNF180Q86T96 CD99P1-205ENST00000527459 561 ntBASIC24.51■■□□□ 1.51
RNF180Q86T96 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
RNF180Q86T96 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.51■■□□□ 1.51
RNF180Q86T96 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
RNF180Q86T96 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF180Q86T96 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.51■■□□□ 1.51
RNF180Q86T96 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RNF180Q86T96 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF180Q86T96 OXCT2P1-201ENST00000447263 1535 ntBASIC24.51■■□□□ 1.51
RNF180Q86T96 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
RNF180Q86T96 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF180Q86T96 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
RNF180Q86T96 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.5■■□□□ 1.51
RNF180Q86T96 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
RNF180Q86T96 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF180Q86T96 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF180Q86T96 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF180Q86T96 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF180Q86T96 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.49■■□□□ 1.51
RNF180Q86T96 MFSD11-216ENST00000590393 1141 ntBASIC24.49■■□□□ 1.51
RNF180Q86T96 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 AC079630.1-202ENST00000618127 1840 ntBASIC24.49■■□□□ 1.51
RNF180Q86T96 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF180Q86T96 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
RNF180Q86T96 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF180Q86T96 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.48■■□□□ 1.51
RNF180Q86T96 AC142381.3-201ENST00000568208 1670 ntBASIC24.48■■□□□ 1.51
RNF180Q86T96 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF180Q86T96 AL121832.2-201ENST00000610979 668 ntBASIC24.48■■□□□ 1.51
RNF180Q86T96 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF180Q86T96 AC138932.3-201ENST00000567634 1902 ntBASIC24.47■■□□□ 1.51
RNF180Q86T96 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF180Q86T96 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
RNF180Q86T96 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF180Q86T96 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.47■■□□□ 1.51
RNF180Q86T96 AC142086.2-201ENST00000569753 217 ntBASIC24.47■■□□□ 1.51
RNF180Q86T96 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF180Q86T96 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF180Q86T96 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RNF180Q86T96 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RNF180Q86T96 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF180Q86T96 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF180Q86T96 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RNF180Q86T96 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
RNF180Q86T96 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF180Q86T96 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
RNF180Q86T96 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
RNF180Q86T96 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RNF180Q86T96 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.45■■□□□ 1.51
RNF180Q86T96 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF180Q86T96 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF180Q86T96 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF180Q86T96 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF180Q86T96 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF180Q86T96 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF180Q86T96 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF180Q86T96 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF180Q86T96 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF180Q86T96 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.45■■□□□ 1.5
RNF180Q86T96 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.45■■□□□ 1.5
RNF180Q86T96 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF180Q86T96 AC231657.2-201ENST00000624556 255 ntBASIC24.45■■□□□ 1.5
RNF180Q86T96 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RNF180Q86T96 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF180Q86T96 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF180Q86T96 AC083906.2-201ENST00000511578 360 ntBASIC24.44■■□□□ 1.5
RNF180Q86T96 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.44■■□□□ 1.5
RNF180Q86T96 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF180Q86T96 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF180Q86T96 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF180Q86T96 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF180Q86T96 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF180Q86T96 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF180Q86T96 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF180Q86T96 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.43■■□□□ 1.5
RNF180Q86T96 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.43■■□□□ 1.5
RNF180Q86T96 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF180Q86T96 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF180Q86T96 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF180Q86T96 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms